Experiment: Minimal media pH7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07370 and AO356_07375 are separated by 38 nucleotides AO356_07375 and AO356_07380 are separated by 305 nucleotides AO356_07380 and AO356_07385 are separated by 14 nucleotides
AO356_07370: AO356_07370 - nicotinate-nucleotide pyrophosphorylase, at 1,634,635 to 1,635,483
_07370
AO356_07375: AO356_07375 - dephospho-CoA kinase, at 1,635,522 to 1,635,827
_07375
AO356_07380: AO356_07380 - hypothetical protein, at 1,636,133 to 1,636,681
_07380
AO356_07385: AO356_07385 - tRNA-Thr, at 1,636,696 to 1,636,768
_07385
Position (kb)
1635
1636 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1634.530 kb on + strand at 1634.531 kb on - strand at 1634.540 kb on + strand at 1634.540 kb on + strand at 1634.540 kb on + strand at 1634.540 kb on + strand at 1634.540 kb on + strand at 1634.540 kb on + strand at 1634.540 kb on + strand at 1634.541 kb on - strand at 1634.541 kb on - strand at 1634.541 kb on - strand at 1634.541 kb on - strand at 1634.541 kb on - strand at 1634.541 kb on - strand at 1634.541 kb on - strand at 1634.602 kb on + strand at 1634.602 kb on + strand at 1634.602 kb on + strand at 1634.602 kb on + strand at 1634.602 kb on + strand at 1634.602 kb on + strand at 1634.603 kb on - strand at 1634.603 kb on - strand at 1634.603 kb on - strand at 1634.603 kb on - strand at 1634.603 kb on - strand at 1634.603 kb on - strand at 1634.603 kb on - strand at 1634.604 kb on + strand at 1634.604 kb on + strand at 1634.605 kb on - strand at 1634.605 kb on - strand at 1634.605 kb on - strand at 1634.645 kb on + strand at 1634.645 kb on + strand at 1634.645 kb on + strand at 1634.645 kb on + strand at 1634.646 kb on - strand at 1634.646 kb on - strand at 1634.995 kb on + strand, within AO356_07370 at 1635.080 kb on - strand, within AO356_07370 at 1635.124 kb on + strand, within AO356_07370 at 1635.124 kb on + strand, within AO356_07370 at 1635.124 kb on + strand, within AO356_07370 at 1635.125 kb on - strand, within AO356_07370 at 1635.125 kb on - strand, within AO356_07370 at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.415 kb on + strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.416 kb on - strand at 1635.550 kb on + strand at 1635.550 kb on + strand at 1635.550 kb on + strand at 1635.551 kb on - strand at 1635.551 kb on - strand at 1635.638 kb on - strand, within AO356_07375 at 1635.638 kb on - strand, within AO356_07375 at 1635.638 kb on - strand, within AO356_07375 at 1635.638 kb on - strand, within AO356_07375 at 1635.638 kb on - strand, within AO356_07375 at 1635.772 kb on + strand, within AO356_07375 at 1635.772 kb on + strand, within AO356_07375 at 1635.773 kb on - strand, within AO356_07375 at 1635.773 kb on - strand, within AO356_07375 at 1635.773 kb on - strand, within AO356_07375 at 1635.773 kb on - strand, within AO356_07375 at 1635.914 kb on - strand at 1635.981 kb on + strand at 1635.981 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.983 kb on + strand at 1635.984 kb on - strand at 1635.984 kb on - strand at 1635.984 kb on - strand at 1635.984 kb on - strand at 1635.984 kb on - strand at 1635.984 kb on - strand at 1635.984 kb on - strand at 1635.984 kb on - strand at 1635.984 kb on - strand at 1636.016 kb on + strand at 1636.016 kb on + strand at 1636.016 kb on + strand at 1636.016 kb on + strand at 1636.017 kb on - strand at 1636.017 kb on - strand at 1636.017 kb on - strand at 1636.017 kb on - strand at 1636.017 kb on - strand at 1636.017 kb on - strand at 1636.017 kb on - strand at 1636.017 kb on - strand at 1636.022 kb on + strand at 1636.022 kb on + strand at 1636.022 kb on + strand at 1636.023 kb on - strand at 1636.023 kb on - strand at 1636.023 kb on - strand at 1636.023 kb on - strand at 1636.023 kb on - strand at 1636.192 kb on + strand, within AO356_07380 at 1636.280 kb on + strand, within AO356_07380 at 1636.280 kb on + strand, within AO356_07380 at 1636.281 kb on - strand, within AO356_07380 at 1636.281 kb on - strand, within AO356_07380 at 1636.294 kb on + strand, within AO356_07380 at 1636.294 kb on + strand, within AO356_07380 at 1636.294 kb on + strand, within AO356_07380 at 1636.295 kb on - strand, within AO356_07380 at 1636.298 kb on + strand, within AO356_07380 at 1636.299 kb on - strand, within AO356_07380 at 1636.299 kb on - strand, within AO356_07380 at 1636.299 kb on - strand, within AO356_07380 at 1636.299 kb on - strand, within AO356_07380 at 1636.299 kb on - strand, within AO356_07380 at 1636.299 kb on - strand, within AO356_07380 at 1636.299 kb on - strand, within AO356_07380 at 1636.363 kb on + strand, within AO356_07380 at 1636.363 kb on + strand, within AO356_07380 at 1636.364 kb on - strand, within AO356_07380 at 1636.364 kb on - strand, within AO356_07380 at 1636.679 kb on + strand at 1636.680 kb on - strand at 1636.680 kb on - strand at 1636.680 kb on - strand at 1636.733 kb on - strand, within AO356_07385 at 1636.761 kb on - strand at 1636.761 kb on - strand at 1636.776 kb on - strand at 1636.781 kb on + strand at 1636.781 kb on + strand at 1636.781 kb on + strand at 1636.781 kb on + strand at 1636.782 kb on - strand at 1636.782 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Minimal media pH7 remove 1,634,530 + +0.0 1,634,531 - +0.3 1,634,540 + +0.3 1,634,540 + -0.4 1,634,540 + +0.2 1,634,540 + +0.3 1,634,540 + +0.6 1,634,540 + -0.3 1,634,540 + +0.5 1,634,541 - -0.7 1,634,541 - -0.4 1,634,541 - -0.7 1,634,541 - -0.3 1,634,541 - +0.0 1,634,541 - -0.2 1,634,541 - +0.1 1,634,602 + -0.1 1,634,602 + +1.0 1,634,602 + -0.1 1,634,602 + -1.2 1,634,602 + -0.4 1,634,602 + +1.0 1,634,603 - +1.3 1,634,603 - +0.3 1,634,603 - -0.2 1,634,603 - +0.1 1,634,603 - -0.5 1,634,603 - +0.2 1,634,603 - -0.2 1,634,604 + +0.3 1,634,604 + +0.2 1,634,605 - -0.5 1,634,605 - -2.8 1,634,605 - -1.5 1,634,645 + -0.3 1,634,645 + -1.1 1,634,645 + -0.5 1,634,645 + -0.2 1,634,646 - -0.8 1,634,646 - -0.0 1,634,995 + AO356_07370 0.42 -0.7 1,635,080 - AO356_07370 0.52 -1.6 1,635,124 + AO356_07370 0.58 -1.8 1,635,124 + AO356_07370 0.58 -1.2 1,635,124 + AO356_07370 0.58 -1.0 1,635,125 - AO356_07370 0.58 -0.7 1,635,125 - AO356_07370 0.58 -1.2 1,635,415 + +0.8 1,635,415 + -1.5 1,635,415 + -0.6 1,635,415 + -1.7 1,635,415 + -0.8 1,635,415 + -1.9 1,635,415 + -0.6 1,635,415 + +0.1 1,635,415 + -0.7 1,635,415 + -1.5 1,635,415 + -2.1 1,635,415 + -0.7 1,635,416 - +0.2 1,635,416 - -0.4 1,635,416 - -2.6 1,635,416 - -0.3 1,635,416 - -0.4 1,635,416 - -0.5 1,635,416 - -0.7 1,635,416 - -0.4 1,635,416 - -0.9 1,635,416 - -0.7 1,635,416 - -1.8 1,635,416 - -0.7 1,635,416 - -2.2 1,635,416 - -1.6 1,635,550 + -3.7 1,635,550 + +0.4 1,635,550 + +0.3 1,635,551 - +0.1 1,635,551 - -0.3 1,635,638 - AO356_07375 0.38 +0.3 1,635,638 - AO356_07375 0.38 +1.5 1,635,638 - AO356_07375 0.38 +0.2 1,635,638 - AO356_07375 0.38 +0.2 1,635,638 - AO356_07375 0.38 +0.4 1,635,772 + AO356_07375 0.82 -0.0 1,635,772 + AO356_07375 0.82 +0.7 1,635,773 - AO356_07375 0.82 +0.9 1,635,773 - AO356_07375 0.82 +1.3 1,635,773 - AO356_07375 0.82 -0.1 1,635,773 - AO356_07375 0.82 +0.0 1,635,914 - +0.3 1,635,981 + -0.0 1,635,981 + -0.1 1,635,983 + -0.9 1,635,983 + -0.8 1,635,983 + +0.4 1,635,983 + -0.5 1,635,983 + -0.9 1,635,983 + +0.2 1,635,983 + -0.9 1,635,983 + -0.3 1,635,983 + +0.3 1,635,983 + +0.3 1,635,983 + -0.8 1,635,983 + +0.3 1,635,984 - -0.4 1,635,984 - -1.2 1,635,984 - -1.3 1,635,984 - +1.3 1,635,984 - +0.1 1,635,984 - +0.2 1,635,984 - +0.2 1,635,984 - +0.7 1,635,984 - -1.3 1,636,016 + +0.4 1,636,016 + -0.3 1,636,016 + +0.2 1,636,016 + -0.2 1,636,017 - +0.9 1,636,017 - +0.4 1,636,017 - +0.3 1,636,017 - +0.6 1,636,017 - -0.4 1,636,017 - +0.4 1,636,017 - -0.3 1,636,017 - +0.1 1,636,022 + +0.2 1,636,022 + +0.8 1,636,022 + -1.1 1,636,023 - -0.2 1,636,023 - +0.6 1,636,023 - +0.1 1,636,023 - -0.2 1,636,023 - -0.5 1,636,192 + AO356_07380 0.11 +0.1 1,636,280 + AO356_07380 0.27 +0.5 1,636,280 + AO356_07380 0.27 -0.1 1,636,281 - AO356_07380 0.27 -0.4 1,636,281 - AO356_07380 0.27 +0.4 1,636,294 + AO356_07380 0.29 -1.7 1,636,294 + AO356_07380 0.29 +0.0 1,636,294 + AO356_07380 0.29 -0.2 1,636,295 - AO356_07380 0.30 -0.3 1,636,298 + AO356_07380 0.30 +0.5 1,636,299 - AO356_07380 0.30 -0.7 1,636,299 - AO356_07380 0.30 +0.6 1,636,299 - AO356_07380 0.30 +0.3 1,636,299 - AO356_07380 0.30 -1.2 1,636,299 - AO356_07380 0.30 -0.8 1,636,299 - AO356_07380 0.30 +0.1 1,636,299 - AO356_07380 0.30 +0.8 1,636,363 + AO356_07380 0.42 +0.5 1,636,363 + AO356_07380 0.42 +1.1 1,636,364 - AO356_07380 0.42 -0.6 1,636,364 - AO356_07380 0.42 +0.0 1,636,679 + +0.2 1,636,680 - -0.1 1,636,680 - +0.3 1,636,680 - +0.3 1,636,733 - AO356_07385 0.51 -0.6 1,636,761 - -0.1 1,636,761 - +1.3 1,636,776 - -0.4 1,636,781 + +1.0 1,636,781 + +0.6 1,636,781 + +0.2 1,636,781 + +0.8 1,636,782 - -0.9 1,636,782 - +1.2
Or see this region's nucleotide sequence