Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16865

Experiment: Minimal media pH6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH6
3,800,697	+		AO356_16855	0.75	-0.8
3,800,756	+		AO356_16855	0.80	+0.2
3,800,756	+		AO356_16855	0.80	-0.3
3,800,757	-		AO356_16855	0.80	+0.2
3,800,757	-		AO356_16855	0.80	+0.7
3,800,757	-		AO356_16855	0.80	-0.7
3,800,757	-		AO356_16855	0.80	+0.4
3,800,757	-		AO356_16855	0.80	-1.2
3,800,815	+		AO356_16855	0.84	-1.2
3,800,890	+				-1.1
3,800,891	-				-0.0
3,800,891	-				+0.6
3,800,891	-				-0.1
3,800,932	+				-1.1
3,800,932	+				-1.6
3,800,932	+				-0.1
3,800,932	+				-2.0
3,800,932	+				-1.4
3,800,932	+				-2.5
3,800,933	-				-1.8
3,800,933	-				-1.3
3,800,935	+				-1.5
3,800,935	+				-0.3
3,800,935	+				-1.0
3,800,935	+				-0.7
3,800,935	+				-1.1
3,800,935	+				-1.0
3,800,935	+				-0.2
3,800,935	+				-0.6
3,800,935	+				-0.3
3,800,936	-				-0.5
3,800,936	-				+0.4
3,800,936	-				+0.7
3,800,936	-				-0.2
3,800,956	+				+0.0
3,800,957	-				-0.3
3,800,985	+				-2.3
3,800,985	+				-2.9
3,800,985	+				-1.7
3,800,985	+				-0.8
3,800,985	+				-1.5
3,800,985	+				-1.5
3,800,985	+				-0.2
3,800,985	+				+0.2
3,800,985	+				-1.4
3,800,985	+				-1.5
3,800,986	-				-1.2
3,800,986	-				-1.7
3,800,986	-				-0.3
3,800,986	-				-1.2
3,800,986	-				-0.3
3,800,986	-				-0.1
3,800,986	-				-1.3
3,800,986	-				-0.5
3,800,986	-				-0.7
3,800,986	-				-0.5
3,800,986	-				+0.2
3,800,986	-				-0.1
3,800,986	-				-0.2
3,800,986	-				-0.7
3,800,986	-				-1.6
3,800,986	-				+0.1
3,800,986	-				+0.2
3,800,986	-				-0.0
3,800,989	+				-1.7
3,800,989	+				-0.8
3,800,989	+				+0.6
3,800,989	+				-2.1
3,800,989	+				-1.4
3,800,989	+				-1.2
3,800,989	+				+0.6
3,800,989	+				-3.2
3,800,989	+				-0.8
3,800,989	+				-1.8
3,800,989	+				-0.9
3,800,989	+				-1.8
3,800,989	+				-2.6
3,800,989	+				-0.4
3,800,990	-				+0.1
3,800,990	-				-0.4
3,800,990	-				-0.4
3,800,990	-				-0.3
3,800,990	-				-1.0
3,800,990	-				+0.1
3,800,990	-				-1.0
3,800,990	-				-0.6
3,800,990	-				-0.4
3,800,990	-				+0.6
3,800,990	-				+0.5
3,800,990	-				+0.9
3,800,990	-				-0.4
3,800,990	-				-1.1
3,800,999	-				+1.0
3,801,028	+				-0.3
3,801,028	+				-1.4
3,801,028	+				-2.0
3,801,029	-				+1.2
3,801,200	+		AO356_16860	0.22	-1.2
3,801,200	+		AO356_16860	0.22	-1.2
3,801,200	+		AO356_16860	0.22	-1.1
3,801,200	+		AO356_16860	0.22	-1.3
3,801,201	-		AO356_16860	0.22	+0.1
3,801,201	-		AO356_16860	0.22	+0.1
3,801,358	+		AO356_16860	0.58	-0.4
3,801,358	+		AO356_16860	0.58	-0.9
3,801,401	+		AO356_16860	0.68	-0.9
3,801,401	+		AO356_16860	0.68	-0.6
3,801,401	+		AO356_16860	0.68	-0.9
3,801,401	+		AO356_16860	0.68	-2.1
3,801,401	+		AO356_16860	0.68	-0.2
3,801,401	+		AO356_16860	0.68	-2.2
3,801,401	+		AO356_16860	0.68	+0.2
3,801,401	+		AO356_16860	0.68	-1.2
3,801,401	+		AO356_16860	0.68	-0.5
3,801,401	+		AO356_16860	0.68	-0.7
3,801,401	+		AO356_16860	0.68	-2.2
3,801,402	-		AO356_16860	0.69	+0.6
3,801,402	-		AO356_16860	0.69	-1.1
3,801,402	-		AO356_16860	0.69	+0.7
3,801,402	-		AO356_16860	0.69	-0.8
3,801,402	-		AO356_16860	0.69	-0.3
3,801,402	-		AO356_16860	0.69	-0.7
3,801,440	+		AO356_16860	0.77	-1.0
3,801,441	-		AO356_16860	0.78	-1.0
3,801,441	-		AO356_16860	0.78	+0.6
3,801,441	-		AO356_16860	0.78	-0.0
3,801,553	+				-0.7
3,801,553	+				-1.2
3,801,553	+				-1.0
3,801,553	+				-0.9
3,801,554	-				-1.2
3,801,554	-				+0.3
3,801,554	-				-0.8
3,801,554	-				-0.2
3,801,554	-				+0.1
3,801,644	+				-3.3
3,801,644	+				-0.5
3,801,644	+				-0.8
3,801,644	+				-1.3
3,801,645	-				+1.0
3,801,645	-				+0.6
3,801,765	+		AO356_16865	0.17	-1.4
3,801,766	-		AO356_16865	0.17	-1.4
3,801,766	-		AO356_16865	0.17	+0.7
3,801,840	+		AO356_16865	0.23	-0.5
3,801,840	+		AO356_16865	0.23	-0.6
3,801,840	+		AO356_16865	0.23	-1.5
3,801,840	+		AO356_16865	0.23	-2.5
3,801,840	+		AO356_16865	0.23	-0.5
3,801,841	-		AO356_16865	0.24	+1.1
3,801,841	-		AO356_16865	0.24	+0.6
3,802,019	+		AO356_16865	0.39	-0.2
3,802,020	-		AO356_16865	0.39	-0.2
3,802,275	-		AO356_16865	0.61	+0.1
3,802,275	-		AO356_16865	0.61	-0.0
3,802,322	+		AO356_16865	0.65	-0.5
3,802,322	+		AO356_16865	0.65	-1.2
3,802,323	-		AO356_16865	0.65	-0.2
3,802,323	-		AO356_16865	0.65	-0.5
3,802,323	-		AO356_16865	0.65	+0.5
3,802,355	+		AO356_16865	0.67	-1.0
3,802,577	+		AO356_16865	0.86	-0.9
3,802,619	+		AO356_16865	0.90	-2.3
3,802,619	+		AO356_16865	0.90	-1.4
3,802,619	+		AO356_16865	0.90	-2.1
3,802,619	+		AO356_16865	0.90	-2.1
3,802,620	-				-1.2
3,802,620	-				+0.1
3,802,620	-				-1.1
3,802,676	+				-1.2
3,802,676	+				-2.2
3,802,676	+				-0.5
3,802,783	+				-1.8
3,802,783	+				-2.2
3,802,783	+				-2.0
3,802,784	-				-0.4
3,802,784	-				-1.9
3,803,041	+		AO356_16870	0.25	-4.3
3,803,041	+		AO356_16870	0.25	-2.5
3,803,041	+		AO356_16870	0.25	-1.5
3,803,041	+		AO356_16870	0.25	-3.6
3,803,042	-		AO356_16870	0.26	-3.2
3,803,042	-		AO356_16870	0.26	-2.1
3,803,042	-		AO356_16870	0.26	-2.8
3,803,042	-		AO356_16870	0.26	-1.9
3,803,071	+		AO356_16870	0.28	-1.8
3,803,071	+		AO356_16870	0.28	-1.0
3,803,072	-		AO356_16870	0.28	-4.2
3,803,072	-		AO356_16870	0.28	-2.5
3,803,219	-		AO356_16870	0.40	-2.0
3,803,235	+		AO356_16870	0.42	-3.6
3,803,235	+		AO356_16870	0.42	-3.1
3,803,235	+		AO356_16870	0.42	-4.4
3,803,235	+		AO356_16870	0.42	-3.1
3,803,236	-		AO356_16870	0.42	-3.0
3,803,236	-		AO356_16870	0.42	-2.7
3,803,236	-		AO356_16870	0.42	-3.3
3,803,236	-		AO356_16870	0.42	-3.7
3,803,236	-		AO356_16870	0.42	-2.6
3,803,254	+		AO356_16870	0.43	-2.6
3,803,254	+		AO356_16870	0.43	-2.6
3,803,254	+		AO356_16870	0.43	-2.4
3,803,254	+		AO356_16870	0.43	-3.6
3,803,255	-		AO356_16870	0.43	-2.9
3,803,255	-		AO356_16870	0.43	-3.4
3,803,255	-		AO356_16870	0.43	-2.6
3,803,255	-		AO356_16870	0.43	-3.4
3,803,431	+		AO356_16870	0.58	-2.7
3,803,461	+		AO356_16870	0.60	-0.7
3,803,461	+		AO356_16870	0.60	-2.5
3,803,462	-		AO356_16870	0.60	-2.6
3,803,462	-		AO356_16870	0.60	-2.8
3,803,644	+		AO356_16870	0.75	-2.8
3,803,644	+		AO356_16870	0.75	-2.9
3,803,644	+		AO356_16870	0.75	-3.8
3,803,644	+		AO356_16870	0.75	-3.3
3,803,644	+		AO356_16870	0.75	-3.1
3,803,645	-		AO356_16870	0.76	-2.5
3,803,645	-		AO356_16870	0.76	-4.6
3,803,645	-		AO356_16870	0.76	-0.6
3,803,645	-		AO356_16870	0.76	-2.3
3,803,645	-		AO356_16870	0.76	-3.1
3,803,645	-		AO356_16870	0.76	-2.8
3,803,689	-		AO356_16870	0.79	-2.8