Experiment: acetate; Light intensity 18 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rru_A2072 and Rru_A2073 are separated by 123 nucleotides Rru_A2073 and Rru_A2074 are separated by 146 nucleotides
Rru_A2072: Rru_A2072 - Aspartyl-tRNA synthetase (NCBI), at 2,397,395 to 2,399,215
_A2072
Rru_A2073: Rru_A2073 - Ribonuclease D (NCBI), at 2,399,339 to 2,400,499
_A2073
Rru_A2074: Rru_A2074 - Thiosulphate-binding protein (NCBI), at 2,400,646 to 2,401,740
_A2074
Position (kb)
2399
2400
2401 Strain fitness (log2 ratio)
-1
0
1 at 2399.327 kb on + strand at 2400.497 kb on + strand at 2400.497 kb on + strand at 2400.498 kb on - strand at 2400.498 kb on - strand at 2400.498 kb on - strand at 2400.498 kb on - strand at 2400.498 kb on - strand at 2400.500 kb on + strand at 2400.647 kb on + strand at 2400.647 kb on + strand at 2400.759 kb on + strand, within Rru_A2074 at 2400.760 kb on - strand, within Rru_A2074 at 2400.866 kb on + strand, within Rru_A2074 at 2400.866 kb on + strand, within Rru_A2074 at 2400.867 kb on - strand, within Rru_A2074 at 2400.867 kb on - strand, within Rru_A2074 at 2400.867 kb on - strand, within Rru_A2074 at 2400.867 kb on - strand, within Rru_A2074 at 2400.867 kb on - strand, within Rru_A2074 at 2400.867 kb on - strand, within Rru_A2074 at 2400.881 kb on + strand, within Rru_A2074 at 2400.882 kb on - strand, within Rru_A2074 at 2400.882 kb on - strand, within Rru_A2074 at 2401.142 kb on + strand, within Rru_A2074 at 2401.142 kb on + strand, within Rru_A2074 at 2401.143 kb on - strand, within Rru_A2074 at 2401.344 kb on + strand, within Rru_A2074 at 2401.344 kb on + strand, within Rru_A2074 at 2401.344 kb on + strand, within Rru_A2074 at 2401.345 kb on - strand, within Rru_A2074 at 2401.345 kb on - strand, within Rru_A2074 at 2401.346 kb on + strand, within Rru_A2074 at 2401.346 kb on + strand, within Rru_A2074 at 2401.346 kb on + strand, within Rru_A2074 at 2401.346 kb on + strand, within Rru_A2074 at 2401.347 kb on - strand, within Rru_A2074 at 2401.361 kb on + strand, within Rru_A2074 at 2401.361 kb on + strand, within Rru_A2074 at 2401.420 kb on - strand, within Rru_A2074
Per-strain Table
Position Strand Gene LocusTag Fraction acetate; Light intensity 18 uM remove 2,399,327 + -0.0 2,400,497 + +1.3 2,400,497 + +0.4 2,400,498 - +1.3 2,400,498 - +0.7 2,400,498 - -0.0 2,400,498 - -0.2 2,400,498 - +0.7 2,400,500 + -0.0 2,400,647 + +0.7 2,400,647 + +0.3 2,400,759 + Rru_A2074 0.10 -0.0 2,400,760 - Rru_A2074 0.10 +1.5 2,400,866 + Rru_A2074 0.20 -0.0 2,400,866 + Rru_A2074 0.20 -0.0 2,400,867 - Rru_A2074 0.20 -0.0 2,400,867 - Rru_A2074 0.20 -1.0 2,400,867 - Rru_A2074 0.20 -0.2 2,400,867 - Rru_A2074 0.20 -0.0 2,400,867 - Rru_A2074 0.20 +0.8 2,400,867 - Rru_A2074 0.20 +1.2 2,400,881 + Rru_A2074 0.21 -0.0 2,400,882 - Rru_A2074 0.22 +0.3 2,400,882 - Rru_A2074 0.22 -0.0 2,401,142 + Rru_A2074 0.45 -0.0 2,401,142 + Rru_A2074 0.45 +0.3 2,401,143 - Rru_A2074 0.45 +0.1 2,401,344 + Rru_A2074 0.64 +0.2 2,401,344 + Rru_A2074 0.64 -0.1 2,401,344 + Rru_A2074 0.64 -0.0 2,401,345 - Rru_A2074 0.64 -0.0 2,401,345 - Rru_A2074 0.64 +0.6 2,401,346 + Rru_A2074 0.64 -0.1 2,401,346 + Rru_A2074 0.64 +0.4 2,401,346 + Rru_A2074 0.64 -0.0 2,401,346 + Rru_A2074 0.64 -0.0 2,401,347 - Rru_A2074 0.64 +0.4 2,401,361 + Rru_A2074 0.65 -0.1 2,401,361 + Rru_A2074 0.65 -0.0 2,401,420 - Rru_A2074 0.71 -0.0
Or see this region's nucleotide sequence