Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0865

Experiment: acetate; Light intensity 18 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 18 uM
1,031,337	+		Rru_A0864	0.67	-1.5
1,031,337	+		Rru_A0864	0.67	-0.9
1,031,337	+		Rru_A0864	0.67	-1.7
1,031,338	-		Rru_A0864	0.67	-3.2
1,031,338	-		Rru_A0864	0.67	-2.7
1,031,664	+		Rru_A0864	0.85	-1.3
1,031,664	+		Rru_A0864	0.85	+0.1
1,031,664	+		Rru_A0864	0.85	-0.4
1,031,665	-		Rru_A0864	0.85	-1.3
1,031,667	+		Rru_A0864	0.85	+0.1
1,031,668	-		Rru_A0864	0.86	-1.7
1,031,668	-		Rru_A0864	0.86	+0.1
1,031,668	-		Rru_A0864	0.86	-0.3
1,031,677	+		Rru_A0864	0.86	+0.1
1,031,678	-		Rru_A0864	0.86	+0.1
1,031,678	-		Rru_A0864	0.86	-0.9
1,031,679	+		Rru_A0864	0.86	-2.5
1,031,679	+		Rru_A0864	0.86	-1.1
1,031,679	+		Rru_A0864	0.86	+0.1
1,031,680	-		Rru_A0864	0.86	+0.1
1,031,680	-		Rru_A0864	0.86	-0.1
1,031,680	-		Rru_A0864	0.86	-0.6
1,031,680	-		Rru_A0864	0.86	+0.1
1,031,695	+		Rru_A0864	0.87	+0.1
1,031,793	+				+0.1
1,031,793	+				+0.1
1,031,794	-				-1.8
1,031,948	+				+0.1
1,031,948	+				+0.1
1,031,949	-				+0.1
1,031,949	-				-1.1
1,032,053	-				+0.1
1,032,053	-				-2.0
1,032,076	+				+0.1
1,032,076	+				-1.8
1,032,077	-				+0.1
1,032,077	-				+0.1
1,032,077	-				-1.9
1,032,078	+				+0.1
1,032,078	+				-1.2
1,032,078	+				+0.1
1,032,078	+				+0.1
1,032,079	-				+0.1
1,032,135	+				+0.1
1,032,200	-				-1.7
1,032,240	-				-1.5
1,032,258	+				+0.1
1,032,298	+				-1.6
1,032,298	+				+0.1
1,032,299	-				+0.1
1,032,299	-				-1.6
1,032,299	-				+0.3
1,032,299	-				+0.1
1,032,299	-				-1.3
1,032,302	+				-0.9
1,032,302	+				-0.8
1,032,302	+				-2.0
1,032,303	-				+0.1
1,032,412	+				+0.1
1,032,413	-				+0.1
1,032,413	-				-0.9
1,032,413	-				-1.1
1,032,513	+				-0.1
1,032,513	+				-1.4
1,032,663	+		Rru_A0865	0.17	-1.2
1,032,663	+		Rru_A0865	0.17	+0.1
1,032,663	+		Rru_A0865	0.17	-0.9
1,032,663	+		Rru_A0865	0.17	-1.1
1,032,663	+		Rru_A0865	0.17	+0.0
1,032,663	+		Rru_A0865	0.17	-1.0
1,032,663	+		Rru_A0865	0.17	-0.2
1,032,663	+		Rru_A0865	0.17	+0.1
1,032,663	+		Rru_A0865	0.17	-1.7
1,032,663	+		Rru_A0865	0.17	-0.8
1,032,663	+		Rru_A0865	0.17	-1.3
1,032,664	-		Rru_A0865	0.17	-0.6
1,032,664	-		Rru_A0865	0.17	+0.1
1,032,664	-		Rru_A0865	0.17	+0.1
1,032,665	+		Rru_A0865	0.17	-0.8
1,032,665	+		Rru_A0865	0.17	+0.1
1,032,665	+		Rru_A0865	0.17	-1.1
1,032,665	+		Rru_A0865	0.17	+0.1
1,032,666	-		Rru_A0865	0.17	-0.8
1,032,666	-		Rru_A0865	0.17	-1.0
1,032,846	+		Rru_A0865	0.25	-1.5
1,032,846	+		Rru_A0865	0.25	-1.2
1,032,846	+		Rru_A0865	0.25	-1.1
1,032,878	+		Rru_A0865	0.27	+0.1
1,032,878	+		Rru_A0865	0.27	-0.3
1,032,878	+		Rru_A0865	0.27	+0.1
1,032,879	-		Rru_A0865	0.27	-1.2
1,032,939	+		Rru_A0865	0.29	-0.9
1,032,939	+		Rru_A0865	0.29	-3.4
1,032,940	-		Rru_A0865	0.29	-1.5
1,032,940	-		Rru_A0865	0.29	-1.3
1,033,146	+		Rru_A0865	0.39	+0.1
1,033,146	+		Rru_A0865	0.39	-0.5
1,033,146	+		Rru_A0865	0.39	-1.3
1,033,146	+		Rru_A0865	0.39	-0.9
1,033,147	-		Rru_A0865	0.39	+0.1
1,033,147	-		Rru_A0865	0.39	-0.2
1,033,234	-		Rru_A0865	0.43	+0.1
1,033,284	+		Rru_A0865	0.45	-2.4
1,033,285	-		Rru_A0865	0.45	-1.3
1,033,285	-		Rru_A0865	0.45	-1.2
1,033,285	-		Rru_A0865	0.45	+0.1
1,033,285	-		Rru_A0865	0.45	+0.1
1,033,323	+		Rru_A0865	0.47	+0.1
1,033,323	+		Rru_A0865	0.47	-1.2
1,033,323	+		Rru_A0865	0.47	-1.3
1,033,324	-		Rru_A0865	0.47	-0.7
1,033,329	+		Rru_A0865	0.47	+0.1
1,033,329	+		Rru_A0865	0.47	-1.5
1,033,350	+		Rru_A0865	0.48	-0.4
1,033,350	+		Rru_A0865	0.48	+0.1
1,033,351	-		Rru_A0865	0.48	-1.2
1,033,404	+		Rru_A0865	0.51	+0.1
1,033,405	-		Rru_A0865	0.51	-2.4
1,033,479	+		Rru_A0865	0.54	-0.3
1,033,480	-		Rru_A0865	0.54	-1.4
1,033,480	-		Rru_A0865	0.54	-1.2
1,033,482	+		Rru_A0865	0.55	-0.6
1,033,482	+		Rru_A0865	0.55	-0.5
1,033,482	+		Rru_A0865	0.55	+0.1
1,033,482	+		Rru_A0865	0.55	+0.1
1,033,483	-		Rru_A0865	0.55	+0.1
1,033,483	-		Rru_A0865	0.55	-1.1
1,033,508	+		Rru_A0865	0.56	+0.1
1,033,577	+		Rru_A0865	0.59	-0.6
1,033,577	+		Rru_A0865	0.59	+0.1
1,033,578	-		Rru_A0865	0.59	+0.1
1,033,644	+		Rru_A0865	0.62	-1.5
1,033,645	-		Rru_A0865	0.62	+0.1
1,033,761	+		Rru_A0865	0.67	-0.9
1,033,762	-		Rru_A0865	0.67	+0.1
1,033,783	+		Rru_A0865	0.68	-1.4
1,033,788	+		Rru_A0865	0.69	+0.1
1,033,788	+		Rru_A0865	0.69	-0.8
1,033,788	+		Rru_A0865	0.69	+0.1
1,033,788	+		Rru_A0865	0.69	-1.4
1,033,789	-		Rru_A0865	0.69	+0.1
1,033,798	-		Rru_A0865	0.69	-0.9
1,033,798	-		Rru_A0865	0.69	-2.5
1,033,809	+		Rru_A0865	0.70	-0.9
1,033,810	-		Rru_A0865	0.70	+0.1
1,033,812	-		Rru_A0865	0.70	-1.2
1,033,812	-		Rru_A0865	0.70	-2.1
1,033,830	-		Rru_A0865	0.71	-1.4
1,033,857	+		Rru_A0865	0.72	+1.1
1,033,869	+		Rru_A0865	0.72	-1.9
1,033,869	+		Rru_A0865	0.72	-1.4
1,033,881	+		Rru_A0865	0.73	-1.4
1,033,998	-		Rru_A0865	0.78	-1.2
1,034,115	+		Rru_A0865	0.84	+0.1
1,034,116	-		Rru_A0865	0.84	+0.1
1,034,116	-		Rru_A0865	0.84	+1.1
1,034,116	-		Rru_A0865	0.84	+0.1
1,034,170	-		Rru_A0865	0.86	+0.1
1,034,171	+		Rru_A0865	0.86	+0.1
1,034,171	+		Rru_A0865	0.86	+0.1
1,034,171	+		Rru_A0865	0.86	+0.1
1,034,172	-		Rru_A0865	0.86	-1.1
1,034,172	-		Rru_A0865	0.86	-1.4
1,034,172	-		Rru_A0865	0.86	-2.0
1,034,172	-		Rru_A0865	0.86	-1.1
1,034,175	+		Rru_A0865	0.87	-1.1
1,034,176	-		Rru_A0865	0.87	-1.3
1,034,176	-		Rru_A0865	0.87	-0.6
1,034,176	-		Rru_A0865	0.87	+0.1
1,034,176	-		Rru_A0865	0.87	-0.7
1,034,176	-		Rru_A0865	0.87	-0.8
1,034,178	-		Rru_A0865	0.87	-1.3
1,034,193	+		Rru_A0865	0.87	-1.6
1,034,193	+		Rru_A0865	0.87	-0.6
1,034,193	+		Rru_A0865	0.87	+0.1
1,034,215	-		Rru_A0865	0.88	+0.1
1,034,215	-		Rru_A0865	0.88	+0.7
1,034,251	-				-1.3
1,034,255	+				-1.7
1,034,267	+				-1.7
1,034,406	+				+0.1
1,034,406	+				+0.1
1,034,407	-				+0.1
1,034,407	-				-0.9
1,034,528	+				-0.5
1,034,528	+				-0.8
1,034,529	-				-0.8
1,034,571	-				-0.3
1,035,253	+		Rru_A0866	0.63	+0.1
1,035,253	+		Rru_A0866	0.63	+0.1
1,035,253	+		Rru_A0866	0.63	+0.1
1,035,253	+		Rru_A0866	0.63	-1.6
1,035,254	-		Rru_A0866	0.63	-0.8
1,035,254	-		Rru_A0866	0.63	-0.9
1,035,254	-		Rru_A0866	0.63	-0.7
1,035,254	-		Rru_A0866	0.63	+0.1
1,035,254	-		Rru_A0866	0.63	-0.7
1,035,375	+		Rru_A0866	0.73	-2.2