Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25655 and BWI76_RS25660 are separated by 27 nucleotides BWI76_RS25660 and BWI76_RS25665 overlap by 29 nucleotides BWI76_RS25665 and BWI76_RS25670 are separated by 129 nucleotides BWI76_RS25670 and BWI76_RS25675 are separated by 14 nucleotides
BWI76_RS25655: BWI76_RS25655 - DNA topoisomerase type IA zn finger domain-containing protein, at 5,328,043 to 5,328,585
_RS25655
BWI76_RS25660: BWI76_RS25660 - hypothetical protein, at 5,328,613 to 5,329,086
_RS25660
BWI76_RS25665: BWI76_RS25665 - DNA-processing protein DprA, at 5,329,058 to 5,330,182
_RS25665
BWI76_RS25670: BWI76_RS25670 - peptide deformylase, at 5,330,312 to 5,330,821
_RS25670
BWI76_RS25675: BWI76_RS25675 - methionyl-tRNA formyltransferase, at 5,330,836 to 5,331,783
_RS25675
Position (kb)
5329
5330
5331 Strain fitness (log2 ratio)
-1
0
1
2 at 5328.405 kb on - strand, within BWI76_RS25655 at 5328.414 kb on - strand, within BWI76_RS25655 at 5328.470 kb on + strand at 5328.492 kb on - strand, within BWI76_RS25655 at 5328.520 kb on - strand, within BWI76_RS25655 at 5328.763 kb on + strand, within BWI76_RS25660 at 5328.866 kb on + strand, within BWI76_RS25660 at 5328.951 kb on + strand, within BWI76_RS25660 at 5329.015 kb on + strand, within BWI76_RS25660 at 5329.023 kb on - strand, within BWI76_RS25660 at 5329.055 kb on + strand at 5329.133 kb on - strand at 5329.140 kb on + strand at 5329.153 kb on - strand at 5329.215 kb on + strand, within BWI76_RS25665 at 5329.218 kb on - strand, within BWI76_RS25665 at 5329.224 kb on - strand, within BWI76_RS25665 at 5329.345 kb on - strand, within BWI76_RS25665 at 5329.401 kb on - strand, within BWI76_RS25665 at 5329.656 kb on + strand, within BWI76_RS25665 at 5329.656 kb on + strand, within BWI76_RS25665 at 5329.656 kb on + strand, within BWI76_RS25665 at 5329.664 kb on - strand, within BWI76_RS25665 at 5329.664 kb on - strand, within BWI76_RS25665 at 5329.664 kb on - strand, within BWI76_RS25665 at 5329.674 kb on - strand, within BWI76_RS25665 at 5329.674 kb on - strand, within BWI76_RS25665 at 5329.729 kb on - strand, within BWI76_RS25665 at 5329.729 kb on - strand, within BWI76_RS25665 at 5329.789 kb on - strand, within BWI76_RS25665 at 5329.871 kb on - strand, within BWI76_RS25665 at 5329.889 kb on + strand, within BWI76_RS25665 at 5329.897 kb on - strand, within BWI76_RS25665 at 5329.897 kb on - strand, within BWI76_RS25665 at 5329.983 kb on + strand at 5330.022 kb on - strand, within BWI76_RS25665 at 5330.099 kb on - strand at 5330.127 kb on + strand at 5330.130 kb on + strand at 5330.203 kb on - strand at 5330.253 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 5,328,405 - BWI76_RS25655 0.67 -0.2 5,328,414 - BWI76_RS25655 0.68 -1.2 5,328,470 + +2.2 5,328,492 - BWI76_RS25655 0.83 -0.3 5,328,520 - BWI76_RS25655 0.88 +1.0 5,328,763 + BWI76_RS25660 0.32 -0.5 5,328,866 + BWI76_RS25660 0.53 -0.4 5,328,951 + BWI76_RS25660 0.71 -0.3 5,329,015 + BWI76_RS25660 0.85 +0.3 5,329,023 - BWI76_RS25660 0.86 +1.7 5,329,055 + -0.4 5,329,133 - -0.5 5,329,140 + -1.2 5,329,153 - +0.0 5,329,215 + BWI76_RS25665 0.14 -0.6 5,329,218 - BWI76_RS25665 0.14 +0.0 5,329,224 - BWI76_RS25665 0.15 -0.7 5,329,345 - BWI76_RS25665 0.26 +0.9 5,329,401 - BWI76_RS25665 0.30 +0.1 5,329,656 + BWI76_RS25665 0.53 +0.3 5,329,656 + BWI76_RS25665 0.53 +0.5 5,329,656 + BWI76_RS25665 0.53 +0.6 5,329,664 - BWI76_RS25665 0.54 +1.8 5,329,664 - BWI76_RS25665 0.54 +0.3 5,329,664 - BWI76_RS25665 0.54 +0.3 5,329,674 - BWI76_RS25665 0.55 +0.2 5,329,674 - BWI76_RS25665 0.55 +0.2 5,329,729 - BWI76_RS25665 0.60 +0.1 5,329,729 - BWI76_RS25665 0.60 +0.5 5,329,789 - BWI76_RS25665 0.65 +0.8 5,329,871 - BWI76_RS25665 0.72 +0.6 5,329,889 + BWI76_RS25665 0.74 +1.3 5,329,897 - BWI76_RS25665 0.75 +0.3 5,329,897 - BWI76_RS25665 0.75 +0.9 5,329,983 + +0.2 5,330,022 - BWI76_RS25665 0.86 +0.9 5,330,099 - -0.4 5,330,127 + -0.2 5,330,130 + +0.8 5,330,203 - +0.1 5,330,253 + +0.9
Or see this region's nucleotide sequence