Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24165

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24155 and BWI76_RS24160 are separated by 27 nucleotidesBWI76_RS24160 and BWI76_RS24165 are separated by 47 nucleotidesBWI76_RS24165 and BWI76_RS24170 are separated by 193 nucleotides BWI76_RS24155: BWI76_RS24155 - A/G-specific adenine glycosylase, at 5,035,940 to 5,036,998 _RS24155 BWI76_RS24160: BWI76_RS24160 - Fe(2+)-trafficking protein, at 5,037,026 to 5,037,301 _RS24160 BWI76_RS24165: BWI76_RS24165 - lytic murein transglycosylase, at 5,037,349 to 5,038,434 _RS24165 BWI76_RS24170: BWI76_RS24170 - nucleoside permease, at 5,038,628 to 5,039,884 _RS24170 Position (kb) 5037 5038 5039Strain fitness (log2 ratio) -2 -1 0 1 2at 5036.386 kb on + strand, within BWI76_RS24155at 5036.394 kb on - strand, within BWI76_RS24155at 5036.394 kb on - strand, within BWI76_RS24155at 5036.491 kb on + strand, within BWI76_RS24155at 5037.006 kb on - strandat 5037.137 kb on + strand, within BWI76_RS24160at 5037.296 kb on + strandat 5037.435 kb on - strandat 5037.585 kb on + strand, within BWI76_RS24165at 5037.697 kb on - strandat 5037.698 kb on - strand, within BWI76_RS24165at 5037.884 kb on + strand, within BWI76_RS24165at 5037.884 kb on + strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5038.068 kb on + strand, within BWI76_RS24165at 5038.076 kb on - strand, within BWI76_RS24165at 5038.190 kb on + strand, within BWI76_RS24165at 5038.198 kb on - strand, within BWI76_RS24165at 5038.222 kb on - strand, within BWI76_RS24165at 5038.296 kb on + strand, within BWI76_RS24165at 5038.373 kb on - strandat 5038.400 kb on - strandat 5038.406 kb on - strandat 5038.486 kb on + strandat 5038.486 kb on + strandat 5038.730 kb on - strandat 5038.754 kb on + strand, within BWI76_RS24170at 5038.764 kb on - strand, within BWI76_RS24170at 5038.963 kb on + strand, within BWI76_RS24170at 5038.971 kb on - strand, within BWI76_RS24170at 5039.060 kb on - strand, within BWI76_RS24170at 5039.110 kb on + strand, within BWI76_RS24170at 5039.133 kb on + strand, within BWI76_RS24170at 5039.139 kb on - strand, within BWI76_RS24170at 5039.141 kb on - strand, within BWI76_RS24170at 5039.141 kb on - strand, within BWI76_RS24170at 5039.154 kb on + strand, within BWI76_RS24170at 5039.162 kb on - strand, within BWI76_RS24170at 5039.162 kb on - strand, within BWI76_RS24170

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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5,036,386 + BWI76_RS24155 0.42 -0.3
5,036,394 - BWI76_RS24155 0.43 -0.1
5,036,394 - BWI76_RS24155 0.43 +0.6
5,036,491 + BWI76_RS24155 0.52 -2.4
5,037,006 - -1.1
5,037,137 + BWI76_RS24160 0.40 -0.4
5,037,296 + +0.2
5,037,435 - +1.6
5,037,585 + BWI76_RS24165 0.22 +0.5
5,037,697 - +1.1
5,037,698 - BWI76_RS24165 0.32 +0.1
5,037,884 + BWI76_RS24165 0.49 +0.0
5,037,884 + BWI76_RS24165 0.49 +0.2
5,037,892 - BWI76_RS24165 0.50 +0.7
5,037,892 - BWI76_RS24165 0.50 +0.1
5,037,892 - BWI76_RS24165 0.50 +1.2
5,037,892 - BWI76_RS24165 0.50 +0.4
5,037,892 - BWI76_RS24165 0.50 +0.7
5,038,068 + BWI76_RS24165 0.66 -0.7
5,038,076 - BWI76_RS24165 0.67 +0.0
5,038,190 + BWI76_RS24165 0.77 +0.7
5,038,198 - BWI76_RS24165 0.78 +0.1
5,038,222 - BWI76_RS24165 0.80 +1.0
5,038,296 + BWI76_RS24165 0.87 +0.0
5,038,373 - +0.6
5,038,400 - -0.4
5,038,406 - +0.0
5,038,486 + -0.2
5,038,486 + -0.7
5,038,730 - +0.5
5,038,754 + BWI76_RS24170 0.10 +0.6
5,038,764 - BWI76_RS24170 0.11 -0.1
5,038,963 + BWI76_RS24170 0.27 -0.4
5,038,971 - BWI76_RS24170 0.27 -2.3
5,039,060 - BWI76_RS24170 0.34 +0.4
5,039,110 + BWI76_RS24170 0.38 +0.1
5,039,133 + BWI76_RS24170 0.40 -0.1
5,039,139 - BWI76_RS24170 0.41 +1.8
5,039,141 - BWI76_RS24170 0.41 +0.2
5,039,141 - BWI76_RS24170 0.41 +0.3
5,039,154 + BWI76_RS24170 0.42 -0.9
5,039,162 - BWI76_RS24170 0.42 +0.4
5,039,162 - BWI76_RS24170 0.42 -0.3

Or see this region's nucleotide sequence