Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21210 and BWI76_RS21215 are separated by 112 nucleotides BWI76_RS21215 and BWI76_RS21220 are separated by 73 nucleotides BWI76_RS21220 and BWI76_RS21225 are separated by 55 nucleotides
BWI76_RS21210: BWI76_RS21210 - hypothetical protein, at 4,440,486 to 4,443,761
_RS21210
BWI76_RS21215: BWI76_RS21215 - NAGC-like transcriptional regulator, at 4,443,874 to 4,445,070
_RS21215
BWI76_RS21220: BWI76_RS21220 - membrane protein, at 4,445,144 to 4,445,566
_RS21220
BWI76_RS21225: BWI76_RS21225 - serine hydroxymethyltransferase, at 4,445,622 to 4,446,875
_RS21225
Position (kb) 4443
4444
4445
4446 Strain fitness (log2 ratio) -1
0
1
2 at 4442.889 kb on + strand, within BWI76_RS21210 at 4442.934 kb on - strand, within BWI76_RS21210 at 4443.262 kb on + strand, within BWI76_RS21210 at 4443.634 kb on + strand at 4444.154 kb on - strand, within BWI76_RS21215 at 4444.247 kb on + strand, within BWI76_RS21215 at 4444.255 kb on - strand, within BWI76_RS21215 at 4444.411 kb on - strand, within BWI76_RS21215 at 4444.755 kb on + strand, within BWI76_RS21215 at 4444.887 kb on - strand, within BWI76_RS21215 at 4444.934 kb on + strand, within BWI76_RS21215 at 4445.027 kb on - strand at 4445.165 kb on + strand at 4445.168 kb on - strand at 4445.270 kb on + strand, within BWI76_RS21220 at 4445.283 kb on - strand, within BWI76_RS21220 at 4445.423 kb on + strand, within BWI76_RS21220 at 4445.519 kb on - strand, within BWI76_RS21220 at 4445.573 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 4,442,889 + BWI76_RS21210 0.73 -0.5 4,442,934 - BWI76_RS21210 0.75 +0.6 4,443,262 + BWI76_RS21210 0.85 +0.3 4,443,634 + -1.2 4,444,154 - BWI76_RS21215 0.23 +0.9 4,444,247 + BWI76_RS21215 0.31 +0.9 4,444,255 - BWI76_RS21215 0.32 +0.8 4,444,411 - BWI76_RS21215 0.45 +1.4 4,444,755 + BWI76_RS21215 0.74 +0.5 4,444,887 - BWI76_RS21215 0.85 -0.8 4,444,934 + BWI76_RS21215 0.89 -1.3 4,445,027 - +1.2 4,445,165 + +2.6 4,445,168 - +0.5 4,445,270 + BWI76_RS21220 0.30 -0.5 4,445,283 - BWI76_RS21220 0.33 +0.5 4,445,423 + BWI76_RS21220 0.66 +0.3 4,445,519 - BWI76_RS21220 0.89 -0.2 4,445,573 - +0.7
Or see this region's nucleotide sequence