Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12420 and BWI76_RS12425 are separated by 363 nucleotides BWI76_RS12425 and BWI76_RS12430 are separated by 169 nucleotides BWI76_RS12430 and BWI76_RS12435 are separated by 169 nucleotides
BWI76_RS12420: BWI76_RS12420 - peptide ABC transporter substrate-binding protein SapA, at 2,594,005 to 2,595,648
_RS12420
BWI76_RS12425: BWI76_RS12425 - hypothetical protein, at 2,596,012 to 2,596,296
_RS12425
BWI76_RS12430: BWI76_RS12430 - AraC family transcriptional regulator, at 2,596,466 to 2,598,772
_RS12430
BWI76_RS12435: BWI76_RS12435 - putative amino acid amidohydrolase, at 2,598,942 to 2,600,111
_RS12435
Position (kb)
2596
2597
2598
2599 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2595.881 kb on + strand at 2595.889 kb on - strand at 2595.889 kb on - strand at 2595.889 kb on - strand at 2596.004 kb on - strand at 2596.086 kb on - strand, within BWI76_RS12425 at 2596.105 kb on - strand, within BWI76_RS12425 at 2596.115 kb on - strand, within BWI76_RS12425 at 2596.244 kb on + strand, within BWI76_RS12425 at 2596.252 kb on - strand, within BWI76_RS12425 at 2596.594 kb on + strand at 2596.728 kb on + strand, within BWI76_RS12430 at 2597.157 kb on - strand, within BWI76_RS12430 at 2597.377 kb on - strand, within BWI76_RS12430 at 2597.428 kb on + strand, within BWI76_RS12430 at 2597.566 kb on - strand, within BWI76_RS12430 at 2597.648 kb on - strand, within BWI76_RS12430 at 2597.733 kb on + strand, within BWI76_RS12430 at 2597.844 kb on + strand, within BWI76_RS12430 at 2597.875 kb on - strand, within BWI76_RS12430 at 2597.889 kb on + strand, within BWI76_RS12430 at 2598.015 kb on - strand, within BWI76_RS12430 at 2598.102 kb on + strand, within BWI76_RS12430 at 2598.151 kb on + strand, within BWI76_RS12430 at 2598.151 kb on + strand, within BWI76_RS12430 at 2598.344 kb on - strand, within BWI76_RS12430 at 2598.459 kb on - strand, within BWI76_RS12430 at 2598.543 kb on - strand at 2598.719 kb on + strand at 2598.920 kb on + strand at 2598.969 kb on - strand at 2599.137 kb on - strand, within BWI76_RS12435 at 2599.211 kb on + strand, within BWI76_RS12435 at 2599.219 kb on - strand, within BWI76_RS12435 at 2599.285 kb on - strand, within BWI76_RS12435 at 2599.366 kb on - strand, within BWI76_RS12435 at 2599.366 kb on - strand, within BWI76_RS12435 at 2599.366 kb on - strand, within BWI76_RS12435 at 2599.381 kb on - strand, within BWI76_RS12435 at 2599.657 kb on + strand, within BWI76_RS12435 at 2599.664 kb on + strand, within BWI76_RS12435
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 2,595,881 + +1.0 2,595,889 - -0.3 2,595,889 - -0.2 2,595,889 - -2.1 2,596,004 - -0.5 2,596,086 - BWI76_RS12425 0.26 +0.0 2,596,105 - BWI76_RS12425 0.33 +0.2 2,596,115 - BWI76_RS12425 0.36 -0.1 2,596,244 + BWI76_RS12425 0.81 -0.1 2,596,252 - BWI76_RS12425 0.84 +0.0 2,596,594 + +0.5 2,596,728 + BWI76_RS12430 0.11 +0.3 2,597,157 - BWI76_RS12430 0.30 +0.1 2,597,377 - BWI76_RS12430 0.39 +0.3 2,597,428 + BWI76_RS12430 0.42 +0.0 2,597,566 - BWI76_RS12430 0.48 +1.3 2,597,648 - BWI76_RS12430 0.51 +1.0 2,597,733 + BWI76_RS12430 0.55 +0.7 2,597,844 + BWI76_RS12430 0.60 +0.2 2,597,875 - BWI76_RS12430 0.61 +0.1 2,597,889 + BWI76_RS12430 0.62 +0.3 2,598,015 - BWI76_RS12430 0.67 +1.7 2,598,102 + BWI76_RS12430 0.71 +0.6 2,598,151 + BWI76_RS12430 0.73 +0.7 2,598,151 + BWI76_RS12430 0.73 +0.4 2,598,344 - BWI76_RS12430 0.81 -0.8 2,598,459 - BWI76_RS12430 0.86 +0.2 2,598,543 - -0.8 2,598,719 + +2.2 2,598,920 + +0.3 2,598,969 - +1.1 2,599,137 - BWI76_RS12435 0.17 +0.2 2,599,211 + BWI76_RS12435 0.23 +0.4 2,599,219 - BWI76_RS12435 0.24 -0.6 2,599,285 - BWI76_RS12435 0.29 -2.4 2,599,366 - BWI76_RS12435 0.36 +0.6 2,599,366 - BWI76_RS12435 0.36 +0.1 2,599,366 - BWI76_RS12435 0.36 +1.0 2,599,381 - BWI76_RS12435 0.38 -0.3 2,599,657 + BWI76_RS12435 0.61 -0.3 2,599,664 + BWI76_RS12435 0.62 -0.4
Or see this region's nucleotide sequence