Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5302

Experiment: thiosulfate 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	thiosulfate 0.25 M
6,095,558	+		Pf6N2E2_5300	0.83	-1.2
6,095,558	+		Pf6N2E2_5300	0.83	-1.2
6,095,564	+		Pf6N2E2_5300	0.83	-1.3
6,095,637	+		Pf6N2E2_5300	0.89	+0.9
6,095,694	+				-3.1
6,095,786	+				-3.0
6,095,786	+				+0.7
6,095,789	+				+0.6
6,095,792	+				-0.9
6,095,793	-				-0.7
6,095,793	-				-0.6
6,095,829	+				+0.4
6,095,829	+				+0.9
6,095,830	-				+0.5
6,095,830	-				-0.2
6,095,830	-				+0.7
6,095,830	-				-0.4
6,095,830	-				+0.5
6,095,866	+				-1.3
6,095,866	+				-0.3
6,095,871	-				+0.5
6,095,957	+		Pf6N2E2_5301	0.34	-0.1
6,095,957	+		Pf6N2E2_5301	0.34	-0.3
6,095,957	+		Pf6N2E2_5301	0.34	-0.3
6,095,958	-		Pf6N2E2_5301	0.34	-0.7
6,095,958	-		Pf6N2E2_5301	0.34	-1.9
6,095,958	-		Pf6N2E2_5301	0.34	-0.2
6,095,958	-		Pf6N2E2_5301	0.34	+0.4
6,095,958	-		Pf6N2E2_5301	0.34	-0.5
6,095,958	-		Pf6N2E2_5301	0.34	-0.3
6,096,025	+		Pf6N2E2_5301	0.60	-0.1
6,096,026	-		Pf6N2E2_5301	0.60	+0.4
6,096,026	-		Pf6N2E2_5301	0.60	+0.2
6,096,112	+				-1.7
6,096,112	+				+0.3
6,096,112	+				-1.4
6,096,112	+				-0.6
6,096,112	+				+1.0
6,096,113	-				+0.5
6,096,113	-				+0.9
6,096,113	-				-0.6
6,096,113	-				-1.3
6,096,113	-				-0.4
6,096,198	-				+0.0
6,096,231	+				-1.3
6,096,231	+				+0.2
6,096,232	-				+1.3
6,096,232	-				-1.2
6,096,236	+				+0.5
6,096,236	+				-0.7
6,096,430	+				-0.1
6,096,431	-				-0.2
6,096,431	-				+1.7
6,096,439	+				-0.8
6,096,439	+				-0.3
6,096,439	+				+0.6
6,096,439	+				-1.2
6,096,439	+				-0.5
6,096,439	+				-1.5
6,096,439	+				+0.3
6,096,439	+				+0.9
6,096,440	-				-1.2
6,096,440	-				-0.4
6,096,440	-				-0.5
6,096,440	-				+0.7
6,096,440	-				+0.0
6,096,676	+		Pf6N2E2_5302	0.46	+0.0
6,096,676	+		Pf6N2E2_5302	0.46	-1.1
6,096,676	+		Pf6N2E2_5302	0.46	-0.6
6,096,677	-		Pf6N2E2_5302	0.46	-0.8
6,096,677	-		Pf6N2E2_5302	0.46	-0.2
6,096,677	-		Pf6N2E2_5302	0.46	+0.6
6,096,677	-		Pf6N2E2_5302	0.46	-0.5
6,096,677	-		Pf6N2E2_5302	0.46	-0.1
6,096,715	+		Pf6N2E2_5302	0.54	-0.4
6,096,715	+		Pf6N2E2_5302	0.54	-0.8
6,096,715	+		Pf6N2E2_5302	0.54	-1.0
6,096,716	-		Pf6N2E2_5302	0.54	+2.9
6,096,716	-		Pf6N2E2_5302	0.54	+0.8
6,096,716	-		Pf6N2E2_5302	0.54	-1.1
6,096,716	-		Pf6N2E2_5302	0.54	+0.5
6,096,793	+		Pf6N2E2_5302	0.69	-1.9
6,096,793	+		Pf6N2E2_5302	0.69	+0.4
6,096,793	+		Pf6N2E2_5302	0.69	+1.2
6,096,793	+		Pf6N2E2_5302	0.69	-1.7
6,096,793	+		Pf6N2E2_5302	0.69	-0.8
6,096,794	-		Pf6N2E2_5302	0.70	-0.5
6,096,794	-		Pf6N2E2_5302	0.70	+0.7
6,096,794	-		Pf6N2E2_5302	0.70	+0.4
6,096,794	-		Pf6N2E2_5302	0.70	-0.5
6,096,794	-		Pf6N2E2_5302	0.70	-0.4
6,096,794	-		Pf6N2E2_5302	0.70	-1.3
6,096,794	-		Pf6N2E2_5302	0.70	-0.8
6,096,794	-		Pf6N2E2_5302	0.70	-0.1
6,096,794	-		Pf6N2E2_5302	0.70	+0.8
6,096,845	-		Pf6N2E2_5302	0.80	+0.2
6,096,943	+				-0.3
6,096,943	+				-0.7
6,097,213	+		Pf6N2E2_5303	0.85	+0.7
6,097,419	+				+0.4
6,097,420	-				+0.9
6,097,420	-				-0.0
6,097,429	+				+0.2
6,097,429	+				-0.2
6,097,429	+				+1.2
6,097,429	+				+1.0
6,097,430	-				-0.4
6,097,430	-				+1.2
6,097,430	-				-0.3
6,097,529	+				+0.6
6,097,573	-				-1.0
6,097,637	+				-0.3
6,097,638	-				-2.7
6,097,651	+				+1.3
6,097,651	+				+0.0
6,097,651	+				-0.4
6,097,651	+				+0.9
6,097,651	+				-1.4
6,097,652	-				-0.8
6,097,700	+				-0.2
6,097,744	+				-1.0
6,097,745	-				-0.2
6,097,753	+				-0.6
6,097,765	+				+0.7
6,097,765	+				-0.2
6,097,765	+				-0.6
6,097,766	-				-0.8
6,097,766	-				-1.1
6,097,795	+				-0.5
6,097,796	-				-0.9
6,097,796	-				-0.3
6,097,831	+		Pf6N2E2_5304	0.16	-0.2
6,097,831	+		Pf6N2E2_5304	0.16	-1.1
6,097,831	+		Pf6N2E2_5304	0.16	+0.1
6,097,831	+		Pf6N2E2_5304	0.16	-0.2
6,097,831	+		Pf6N2E2_5304	0.16	-0.2
6,097,831	+		Pf6N2E2_5304	0.16	+1.5
6,097,831	+		Pf6N2E2_5304	0.16	+0.4
6,097,831	+		Pf6N2E2_5304	0.16	-0.6
6,097,831	+		Pf6N2E2_5304	0.16	-0.5
6,097,832	-		Pf6N2E2_5304	0.16	+0.7
6,097,832	-		Pf6N2E2_5304	0.16	+0.3
6,097,832	-		Pf6N2E2_5304	0.16	-0.8
6,097,832	-		Pf6N2E2_5304	0.16	+0.1
6,097,832	-		Pf6N2E2_5304	0.16	+0.5
6,097,832	-		Pf6N2E2_5304	0.16	+0.1
6,097,832	-		Pf6N2E2_5304	0.16	-1.3
6,097,832	-		Pf6N2E2_5304	0.16	+2.3
6,097,832	-		Pf6N2E2_5304	0.16	-0.7
6,097,832	-		Pf6N2E2_5304	0.16	-0.7
6,097,834	+		Pf6N2E2_5304	0.17	-0.6
6,097,834	+		Pf6N2E2_5304	0.17	-0.7
6,097,835	-		Pf6N2E2_5304	0.17	-1.0
6,097,835	-		Pf6N2E2_5304	0.17	-0.6
6,097,835	-		Pf6N2E2_5304	0.17	-1.0