Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4439

Experiment: thiosulfate 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	thiosulfate 0.25 M
5,169,647	-		Pf6N2E2_4437	0.60	-0.5
5,169,685	-		Pf6N2E2_4437	0.63	-1.3
5,170,115	+				+0.6
5,170,115	+				-1.9
5,170,116	-				+0.5
5,170,405	+		Pf6N2E2_4438	0.63	-1.1
5,170,405	+		Pf6N2E2_4438	0.63	-2.8
5,170,405	+		Pf6N2E2_4438	0.63	-0.1
5,170,406	-		Pf6N2E2_4438	0.63	-1.2
5,170,406	-		Pf6N2E2_4438	0.63	+0.2
5,170,525	+		Pf6N2E2_4438	0.88	-0.3
5,170,526	-		Pf6N2E2_4438	0.89	+0.7
5,170,541	+				+1.5
5,170,541	+				+0.2
5,170,541	+				+1.1
5,170,541	+				-0.4
5,170,584	+				+1.6
5,170,612	+				+0.9
5,170,612	+				-0.1
5,170,628	+				+0.3
5,170,629	-				+0.6
5,170,629	-				+0.1
5,170,654	+				+0.5
5,170,654	+				+0.5
5,170,655	-				+0.6
5,170,678	+				-1.3
5,170,678	+				-0.7
5,170,679	-				+0.3
5,170,679	-				-1.3
5,170,875	+		Pf6N2E2_4439	0.13	-1.4
5,170,875	+		Pf6N2E2_4439	0.13	+0.3
5,170,875	+		Pf6N2E2_4439	0.13	+0.2
5,170,875	+		Pf6N2E2_4439	0.13	-0.5
5,170,876	-		Pf6N2E2_4439	0.13	-1.0
5,170,876	-		Pf6N2E2_4439	0.13	-0.3
5,170,995	+		Pf6N2E2_4439	0.19	-0.0
5,170,996	-		Pf6N2E2_4439	0.19	-0.2
5,171,042	+		Pf6N2E2_4439	0.22	+1.4
5,171,307	+		Pf6N2E2_4439	0.35	-0.4
5,171,307	+		Pf6N2E2_4439	0.35	+0.1
5,171,308	-		Pf6N2E2_4439	0.36	-2.1
5,171,321	+		Pf6N2E2_4439	0.36	-0.3
5,171,373	+		Pf6N2E2_4439	0.39	+0.4
5,171,412	+		Pf6N2E2_4439	0.41	-0.6
5,171,412	+		Pf6N2E2_4439	0.41	+0.4
5,171,412	+		Pf6N2E2_4439	0.41	+0.9
5,171,412	+		Pf6N2E2_4439	0.41	+0.3
5,171,412	+		Pf6N2E2_4439	0.41	-2.1
5,171,413	-		Pf6N2E2_4439	0.41	-0.6
5,171,413	-		Pf6N2E2_4439	0.41	+0.7
5,171,678	+		Pf6N2E2_4439	0.55	-0.1
5,171,678	+		Pf6N2E2_4439	0.55	-0.2
5,172,171	+		Pf6N2E2_4439	0.81	+1.9
5,172,171	+		Pf6N2E2_4439	0.81	+1.1
5,172,172	-		Pf6N2E2_4439	0.81	-0.2
5,172,394	-				+0.4
5,172,559	+				+2.2
5,172,559	+				+0.1
5,172,559	+				+1.8
5,172,559	+				+0.6
5,172,559	+				-0.3
5,172,559	+				-0.6
5,172,560	-				-1.0
5,172,789	+		Pf6N2E2_4440	0.43	-0.0
5,172,790	-		Pf6N2E2_4440	0.43	+0.8
5,172,853	-		Pf6N2E2_4440	0.54	+0.3
5,172,884	+		Pf6N2E2_4440	0.59	+1.8
5,172,884	+		Pf6N2E2_4440	0.59	-0.9
5,172,884	+		Pf6N2E2_4440	0.59	-0.3
5,172,885	-		Pf6N2E2_4440	0.59	+0.1
5,172,885	-		Pf6N2E2_4440	0.59	-2.0
5,172,885	-		Pf6N2E2_4440	0.59	-0.2
5,172,885	-		Pf6N2E2_4440	0.59	-0.4
5,172,885	-		Pf6N2E2_4440	0.59	-1.5
5,172,983	+		Pf6N2E2_4440	0.76	+1.7
5,172,983	+		Pf6N2E2_4440	0.76	+0.8
5,172,983	+		Pf6N2E2_4440	0.76	+0.5
5,172,984	-		Pf6N2E2_4440	0.76	-0.4
5,172,984	-		Pf6N2E2_4440	0.76	-0.5
5,172,984	-		Pf6N2E2_4440	0.76	-0.0
5,173,038	+		Pf6N2E2_4440	0.86	+0.3
5,173,038	+		Pf6N2E2_4440	0.86	-0.5
5,173,118	+				+1.0
5,173,118	+				+0.9
5,173,130	-				+1.3
5,173,180	-				-2.6
5,173,224	+				+0.3
5,173,224	+				-0.3
5,173,224	+				-0.6
5,173,224	+				+0.1
5,173,224	+				+0.7
5,173,225	-				-1.5
5,173,225	-				+0.9
5,173,225	-				+1.6
5,173,225	-				-0.7
5,173,225	-				-0.5
5,173,225	-				+0.3
5,173,229	+				-0.5
5,173,230	-				-0.5
5,173,480	+		Pf6N2E2_4441	0.34	-1.0
5,173,480	+		Pf6N2E2_4441	0.34	-0.1
5,173,481	-		Pf6N2E2_4441	0.34	+0.7
5,173,481	-		Pf6N2E2_4441	0.34	-0.7
5,173,481	-		Pf6N2E2_4441	0.34	-1.0
5,173,481	-		Pf6N2E2_4441	0.34	-0.2
5,173,481	-		Pf6N2E2_4441	0.34	-1.4
5,173,507	+		Pf6N2E2_4441	0.38	+0.1
5,173,507	+		Pf6N2E2_4441	0.38	-1.7
5,173,516	+		Pf6N2E2_4441	0.40	+0.5