Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2159

Experiment: thiosulfate 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	thiosulfate 0.25 M
2,562,231	+		Pf6N2E2_2157	0.85	-1.2
2,562,231	+		Pf6N2E2_2157	0.85	+0.0
2,562,231	+		Pf6N2E2_2157	0.85	+1.4
2,562,232	-		Pf6N2E2_2157	0.85	+0.1
2,562,232	-		Pf6N2E2_2157	0.85	+1.2
2,562,232	-		Pf6N2E2_2157	0.85	+0.5
2,562,232	-		Pf6N2E2_2157	0.85	+0.2
2,562,259	-		Pf6N2E2_2157	0.88	+0.6
2,562,524	+				+0.6
2,562,525	-				+0.5
2,562,738	+		Pf6N2E2_2158	0.39	+1.1
2,562,738	+		Pf6N2E2_2158	0.39	+1.2
2,562,738	+		Pf6N2E2_2158	0.39	+0.3
2,562,738	+		Pf6N2E2_2158	0.39	+0.7
2,562,738	+		Pf6N2E2_2158	0.39	+0.9
2,562,739	-		Pf6N2E2_2158	0.39	+0.5
2,562,739	-		Pf6N2E2_2158	0.39	-1.2
2,562,739	-		Pf6N2E2_2158	0.39	-0.2
2,562,739	-		Pf6N2E2_2158	0.39	-1.2
2,562,739	-		Pf6N2E2_2158	0.39	+0.2
2,562,739	-		Pf6N2E2_2158	0.39	+1.0
2,563,274	-		Pf6N2E2_2159	0.20	+0.2
2,563,312	-		Pf6N2E2_2159	0.25	+0.0
2,563,312	-		Pf6N2E2_2159	0.25	-1.3
2,563,391	+		Pf6N2E2_2159	0.36	-0.1
2,563,429	+		Pf6N2E2_2159	0.42	-1.3
2,563,429	+		Pf6N2E2_2159	0.42	+1.3
2,563,429	+		Pf6N2E2_2159	0.42	-0.0
2,563,429	+		Pf6N2E2_2159	0.42	-1.5
2,563,430	-		Pf6N2E2_2159	0.42	-1.0
2,563,430	-		Pf6N2E2_2159	0.42	-0.9
2,563,489	+		Pf6N2E2_2159	0.50	+0.3
2,563,489	+		Pf6N2E2_2159	0.50	-1.1
2,563,489	+		Pf6N2E2_2159	0.50	+0.3
2,563,489	+		Pf6N2E2_2159	0.50	-1.7
2,563,489	+		Pf6N2E2_2159	0.50	-0.3
2,563,490	-		Pf6N2E2_2159	0.50	-1.9
2,563,564	+		Pf6N2E2_2159	0.60	+0.3
2,563,564	+		Pf6N2E2_2159	0.60	-1.6
2,563,565	-		Pf6N2E2_2159	0.61	+1.0
2,563,613	+		Pf6N2E2_2159	0.67	+0.5
2,563,639	+		Pf6N2E2_2159	0.71	-1.3
2,563,639	+		Pf6N2E2_2159	0.71	-2.1
2,563,639	+		Pf6N2E2_2159	0.71	-0.3
2,563,640	-		Pf6N2E2_2159	0.71	+0.4
2,563,640	-		Pf6N2E2_2159	0.71	+0.6
2,563,640	-		Pf6N2E2_2159	0.71	+1.2
2,563,640	-		Pf6N2E2_2159	0.71	-0.1
2,563,640	-		Pf6N2E2_2159	0.71	+0.6
2,563,640	-		Pf6N2E2_2159	0.71	-1.2
2,563,645	+		Pf6N2E2_2159	0.72	-0.9
2,563,759	+		Pf6N2E2_2159	0.88	-0.6
2,563,760	-		Pf6N2E2_2159	0.88	-0.1
2,563,760	-		Pf6N2E2_2159	0.88	-1.5
2,563,841	+				-0.1
2,563,841	+				+0.7
2,563,842	-				-1.9
2,564,029	+				+0.6
2,564,080	-				-0.4
2,564,089	+				+0.9
2,564,089	+				-0.2
2,564,089	+				-0.6
2,564,090	-				+0.1
2,564,090	-				-0.3
2,564,118	+				+1.0
2,564,118	+				+0.3
2,564,156	+				+1.4
2,564,156	+				-0.1
2,564,156	+				-0.8
2,564,156	+				-0.5
2,564,156	+				+0.4
2,564,157	-				-0.1
2,564,157	-				+0.3
2,564,220	-		Pf6N2E2_2160	0.18	+1.1
2,564,240	+		Pf6N2E2_2160	0.21	+2.0
2,564,241	-		Pf6N2E2_2160	0.21	+2.0
2,564,241	-		Pf6N2E2_2160	0.21	+1.2
2,564,374	-		Pf6N2E2_2160	0.39	+0.0
2,564,374	-		Pf6N2E2_2160	0.39	-0.4
2,564,374	-		Pf6N2E2_2160	0.39	+0.5
2,564,374	-		Pf6N2E2_2160	0.39	+0.5
2,564,374	-		Pf6N2E2_2160	0.39	-1.2
2,564,492	+		Pf6N2E2_2160	0.56	-0.3
2,564,492	+		Pf6N2E2_2160	0.56	+0.8
2,564,493	-		Pf6N2E2_2160	0.56	-1.5
2,564,493	-		Pf6N2E2_2160	0.56	+0.0
2,564,493	-		Pf6N2E2_2160	0.56	-2.1
2,564,493	-		Pf6N2E2_2160	0.56	+0.5
2,564,495	+		Pf6N2E2_2160	0.56	+0.2
2,564,495	+		Pf6N2E2_2160	0.56	-0.5
2,564,496	-		Pf6N2E2_2160	0.56	-0.1
2,564,496	-		Pf6N2E2_2160	0.56	+0.4
2,564,496	-		Pf6N2E2_2160	0.56	+1.3
2,564,496	-		Pf6N2E2_2160	0.56	-0.1
2,564,496	-		Pf6N2E2_2160	0.56	-0.3
2,564,569	-		Pf6N2E2_2160	0.67	+0.6