Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07520 and BWI76_RS07525 are separated by 18 nucleotides BWI76_RS07525 and BWI76_RS07530 are separated by 2 nucleotides BWI76_RS07530 and BWI76_RS07535 are separated by 3 nucleotides
BWI76_RS07520: BWI76_RS07520 - ABC transporter substrate-binding protein, at 1,591,167 to 1,592,831
_RS07520
BWI76_RS07525: BWI76_RS07525 - ABC transporter permease, at 1,592,850 to 1,593,803
_RS07525
BWI76_RS07530: BWI76_RS07530 - binding-protein-dependent transport system inner membrane protein, at 1,593,806 to 1,594,699
_RS07530
BWI76_RS07535: BWI76_RS07535 - dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein, at 1,594,703 to 1,595,746
_RS07535
Position (kb) 1592
1593
1594 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1592.148 kb on + strand, within BWI76_RS07520 at 1592.194 kb on - strand, within BWI76_RS07520 at 1592.396 kb on - strand, within BWI76_RS07520 at 1592.458 kb on - strand, within BWI76_RS07520 at 1592.573 kb on - strand, within BWI76_RS07520 at 1592.935 kb on - strand at 1593.006 kb on - strand, within BWI76_RS07525 at 1593.134 kb on + strand, within BWI76_RS07525 at 1593.180 kb on + strand, within BWI76_RS07525 at 1593.234 kb on - strand, within BWI76_RS07525 at 1593.281 kb on + strand, within BWI76_RS07525 at 1593.463 kb on + strand, within BWI76_RS07525 at 1593.775 kb on + strand at 1593.808 kb on + strand at 1594.222 kb on + strand, within BWI76_RS07530 at 1594.316 kb on - strand, within BWI76_RS07530 at 1594.397 kb on + strand, within BWI76_RS07530 at 1594.521 kb on - strand, within BWI76_RS07530 at 1594.597 kb on + strand, within BWI76_RS07530
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 1,592,148 + BWI76_RS07520 0.59 -0.1 1,592,194 - BWI76_RS07520 0.62 -1.3 1,592,396 - BWI76_RS07520 0.74 +0.1 1,592,458 - BWI76_RS07520 0.78 +1.8 1,592,573 - BWI76_RS07520 0.84 -0.7 1,592,935 - -2.9 1,593,006 - BWI76_RS07525 0.16 -1.1 1,593,134 + BWI76_RS07525 0.30 -1.4 1,593,180 + BWI76_RS07525 0.35 -0.3 1,593,234 - BWI76_RS07525 0.40 -1.7 1,593,281 + BWI76_RS07525 0.45 +0.1 1,593,463 + BWI76_RS07525 0.64 -0.3 1,593,775 + +0.3 1,593,808 + +0.0 1,594,222 + BWI76_RS07530 0.47 -0.3 1,594,316 - BWI76_RS07530 0.57 -1.6 1,594,397 + BWI76_RS07530 0.66 -0.5 1,594,521 - BWI76_RS07530 0.80 -1.8 1,594,597 + BWI76_RS07530 0.88 +0.1
Or see this region's nucleotide sequence