Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02800 and BWI76_RS02805 are separated by 10 nucleotides BWI76_RS02805 and BWI76_RS02810 overlap by 14 nucleotides
BWI76_RS02800: BWI76_RS02800 - ABC transporter, at 571,292 to 572,794
_RS02800
BWI76_RS02805: BWI76_RS02805 - sugar ABC transporter permease, at 572,805 to 573,830
_RS02805
BWI76_RS02810: BWI76_RS02810 - sugar ABC transporter permease YjfF, at 573,817 to 574,803
_RS02810
Position (kb) 572
573
574 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 571.814 kb on + strand, within BWI76_RS02800 at 571.912 kb on + strand, within BWI76_RS02800 at 571.912 kb on + strand, within BWI76_RS02800 at 572.002 kb on + strand, within BWI76_RS02800 at 572.058 kb on + strand, within BWI76_RS02800 at 572.586 kb on + strand, within BWI76_RS02800 at 572.633 kb on - strand at 572.689 kb on + strand at 572.739 kb on + strand at 572.865 kb on - strand at 573.046 kb on + strand, within BWI76_RS02805 at 573.263 kb on + strand, within BWI76_RS02805 at 573.268 kb on + strand, within BWI76_RS02805 at 573.526 kb on + strand, within BWI76_RS02805 at 573.558 kb on + strand, within BWI76_RS02805 at 573.881 kb on - strand at 574.280 kb on - strand, within BWI76_RS02810 at 574.280 kb on - strand, within BWI76_RS02810 at 574.549 kb on - strand, within BWI76_RS02810 at 574.598 kb on + strand, within BWI76_RS02810 at 574.690 kb on - strand, within BWI76_RS02810
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 571,814 + BWI76_RS02800 0.35 +0.3 571,912 + BWI76_RS02800 0.41 +2.2 571,912 + BWI76_RS02800 0.41 +1.6 572,002 + BWI76_RS02800 0.47 -0.2 572,058 + BWI76_RS02800 0.51 -2.0 572,586 + BWI76_RS02800 0.86 -0.4 572,633 - +1.1 572,689 + +0.1 572,739 + +0.8 572,865 - +0.4 573,046 + BWI76_RS02805 0.23 -0.7 573,263 + BWI76_RS02805 0.45 +0.4 573,268 + BWI76_RS02805 0.45 -3.8 573,526 + BWI76_RS02805 0.70 -1.6 573,558 + BWI76_RS02805 0.73 +0.3 573,881 - -0.7 574,280 - BWI76_RS02810 0.47 +1.7 574,280 - BWI76_RS02810 0.47 -1.6 574,549 - BWI76_RS02810 0.74 -0.3 574,598 + BWI76_RS02810 0.79 +0.4 574,690 - BWI76_RS02810 0.88 -0.2
Or see this region's nucleotide sequence