Experiment: LB 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10595 and AO356_10600 overlap by 4 nucleotides AO356_10600 and AO356_10605 are separated by 10 nucleotides AO356_10605 and AO356_10610 are separated by 32 nucleotides AO356_10610 and AO356_10615 are separated by 356 nucleotides
AO356_10595: AO356_10595 - mangotoxin biosynthesis-involved protein MgoB, at 2,410,804 to 2,411,580
_10595
AO356_10600: AO356_10600 - aminobenzoate oxygenase, at 2,411,577 to 2,412,509
_10600
AO356_10605: AO356_10605 - peptide transporter, at 2,412,520 to 2,416,086
_10605
AO356_10610: AO356_10610 - polyketide cyclase, at 2,416,119 to 2,416,583
_10610
AO356_10615: AO356_10615 - chemotaxis protein, at 2,416,940 to 2,418,820
_10615
Position (kb)
2412
2413
2414
2415
2416
2417 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2411.593 kb on - strand at 2411.593 kb on - strand at 2411.637 kb on - strand at 2411.769 kb on + strand, within AO356_10600 at 2411.769 kb on + strand, within AO356_10600 at 2411.910 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.209 kb on - strand, within AO356_10600 at 2412.216 kb on + strand, within AO356_10600 at 2412.216 kb on + strand, within AO356_10600 at 2412.285 kb on + strand, within AO356_10600 at 2412.286 kb on - strand, within AO356_10600 at 2412.394 kb on - strand, within AO356_10600 at 2412.476 kb on - strand at 2412.495 kb on + strand at 2412.841 kb on - strand at 2413.123 kb on + strand, within AO356_10605 at 2413.124 kb on - strand, within AO356_10605 at 2413.196 kb on + strand, within AO356_10605 at 2413.196 kb on + strand, within AO356_10605 at 2413.197 kb on - strand, within AO356_10605 at 2413.197 kb on - strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.385 kb on - strand, within AO356_10605 at 2413.424 kb on - strand, within AO356_10605 at 2413.424 kb on - strand, within AO356_10605 at 2413.636 kb on + strand, within AO356_10605 at 2413.636 kb on + strand, within AO356_10605 at 2413.636 kb on + strand, within AO356_10605 at 2413.636 kb on + strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.637 kb on - strand, within AO356_10605 at 2413.711 kb on + strand, within AO356_10605 at 2413.721 kb on - strand, within AO356_10605 at 2414.038 kb on + strand, within AO356_10605 at 2414.038 kb on + strand, within AO356_10605 at 2414.038 kb on + strand, within AO356_10605 at 2414.038 kb on + strand, within AO356_10605 at 2414.039 kb on - strand, within AO356_10605 at 2414.039 kb on - strand, within AO356_10605 at 2414.039 kb on - strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.191 kb on + strand, within AO356_10605 at 2414.192 kb on - strand, within AO356_10605 at 2414.192 kb on - strand, within AO356_10605 at 2414.192 kb on - strand, within AO356_10605 at 2414.192 kb on - strand, within AO356_10605 at 2414.254 kb on + strand, within AO356_10605 at 2414.254 kb on + strand, within AO356_10605 at 2414.296 kb on + strand, within AO356_10605 at 2414.297 kb on - strand, within AO356_10605 at 2414.367 kb on - strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.429 kb on + strand, within AO356_10605 at 2414.430 kb on - strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.560 kb on + strand, within AO356_10605 at 2414.561 kb on - strand, within AO356_10605 at 2414.561 kb on - strand, within AO356_10605 at 2414.561 kb on - strand, within AO356_10605 at 2414.561 kb on - strand, within AO356_10605 at 2414.578 kb on + strand, within AO356_10605 at 2414.578 kb on + strand, within AO356_10605 at 2414.579 kb on - strand, within AO356_10605 at 2414.602 kb on + strand, within AO356_10605 at 2414.602 kb on + strand, within AO356_10605 at 2414.602 kb on + strand, within AO356_10605 at 2414.603 kb on - strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.200 kb on - strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.309 kb on - strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.485 kb on - strand, within AO356_10605 at 2415.752 kb on - strand at 2415.811 kb on + strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.928 kb on + strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2416.043 kb on + strand at 2416.044 kb on - strand at 2416.044 kb on - strand at 2416.044 kb on - strand at 2416.061 kb on - strand at 2416.061 kb on - strand at 2416.395 kb on + strand, within AO356_10610 at 2416.395 kb on + strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB 30C remove 2,411,593 - -0.7 2,411,593 - +0.7 2,411,637 - +0.3 2,411,769 + AO356_10600 0.21 +0.3 2,411,769 + AO356_10600 0.21 +0.1 2,411,910 + AO356_10600 0.36 +0.6 2,412,208 + AO356_10600 0.68 -2.7 2,412,208 + AO356_10600 0.68 -0.7 2,412,208 + AO356_10600 0.68 +1.3 2,412,208 + AO356_10600 0.68 +0.2 2,412,209 - AO356_10600 0.68 +0.1 2,412,216 + AO356_10600 0.68 +0.4 2,412,216 + AO356_10600 0.68 +0.3 2,412,285 + AO356_10600 0.76 +1.2 2,412,286 - AO356_10600 0.76 -0.7 2,412,394 - AO356_10600 0.88 -0.1 2,412,476 - -0.1 2,412,495 + +0.2 2,412,841 - -0.1 2,413,123 + AO356_10605 0.17 +0.1 2,413,124 - AO356_10605 0.17 +0.7 2,413,196 + AO356_10605 0.19 -1.7 2,413,196 + AO356_10605 0.19 -0.5 2,413,197 - AO356_10605 0.19 -0.1 2,413,197 - AO356_10605 0.19 +0.7 2,413,382 + AO356_10605 0.24 +1.1 2,413,382 + AO356_10605 0.24 +0.2 2,413,382 + AO356_10605 0.24 +1.3 2,413,382 + AO356_10605 0.24 +0.1 2,413,382 + AO356_10605 0.24 +1.3 2,413,382 + AO356_10605 0.24 +0.2 2,413,382 + AO356_10605 0.24 +0.0 2,413,382 + AO356_10605 0.24 +0.0 2,413,383 - AO356_10605 0.24 -0.5 2,413,383 - AO356_10605 0.24 +0.3 2,413,383 - AO356_10605 0.24 +0.2 2,413,383 - AO356_10605 0.24 +0.2 2,413,383 - AO356_10605 0.24 -1.7 2,413,383 - AO356_10605 0.24 -0.5 2,413,383 - AO356_10605 0.24 +0.6 2,413,383 - AO356_10605 0.24 -0.2 2,413,383 - AO356_10605 0.24 +0.4 2,413,383 - AO356_10605 0.24 -0.3 2,413,385 - AO356_10605 0.24 +0.2 2,413,424 - AO356_10605 0.25 +0.6 2,413,424 - AO356_10605 0.25 -0.8 2,413,636 + AO356_10605 0.31 -0.7 2,413,636 + AO356_10605 0.31 +0.2 2,413,636 + AO356_10605 0.31 +0.0 2,413,636 + AO356_10605 0.31 -0.9 2,413,637 - AO356_10605 0.31 +0.2 2,413,637 - AO356_10605 0.31 -0.3 2,413,637 - AO356_10605 0.31 -0.3 2,413,637 - AO356_10605 0.31 -0.5 2,413,637 - AO356_10605 0.31 +0.1 2,413,637 - AO356_10605 0.31 +0.1 2,413,637 - AO356_10605 0.31 -0.3 2,413,711 + AO356_10605 0.33 +0.1 2,413,721 - AO356_10605 0.34 -0.8 2,414,038 + AO356_10605 0.43 +0.0 2,414,038 + AO356_10605 0.43 +0.2 2,414,038 + AO356_10605 0.43 -0.8 2,414,038 + AO356_10605 0.43 +0.3 2,414,039 - AO356_10605 0.43 +0.3 2,414,039 - AO356_10605 0.43 +0.7 2,414,039 - AO356_10605 0.43 -1.6 2,414,191 + AO356_10605 0.47 -0.2 2,414,191 + AO356_10605 0.47 +0.2 2,414,191 + AO356_10605 0.47 +0.4 2,414,191 + AO356_10605 0.47 +0.7 2,414,191 + AO356_10605 0.47 +0.5 2,414,192 - AO356_10605 0.47 -0.1 2,414,192 - AO356_10605 0.47 -0.7 2,414,192 - AO356_10605 0.47 +0.4 2,414,192 - AO356_10605 0.47 -1.0 2,414,254 + AO356_10605 0.49 +0.3 2,414,254 + AO356_10605 0.49 -0.8 2,414,296 + AO356_10605 0.50 -0.5 2,414,297 - AO356_10605 0.50 -0.1 2,414,367 - AO356_10605 0.52 +0.3 2,414,429 + AO356_10605 0.54 +0.3 2,414,429 + AO356_10605 0.54 -0.8 2,414,429 + AO356_10605 0.54 -0.2 2,414,429 + AO356_10605 0.54 -0.7 2,414,429 + AO356_10605 0.54 +0.6 2,414,430 - AO356_10605 0.54 -0.6 2,414,560 + AO356_10605 0.57 +1.0 2,414,560 + AO356_10605 0.57 +0.1 2,414,560 + AO356_10605 0.57 -0.2 2,414,560 + AO356_10605 0.57 +0.1 2,414,560 + AO356_10605 0.57 +0.2 2,414,561 - AO356_10605 0.57 +0.2 2,414,561 - AO356_10605 0.57 +0.2 2,414,561 - AO356_10605 0.57 -0.1 2,414,561 - AO356_10605 0.57 -0.2 2,414,578 + AO356_10605 0.58 +0.9 2,414,578 + AO356_10605 0.58 -0.0 2,414,579 - AO356_10605 0.58 -0.5 2,414,602 + AO356_10605 0.58 +1.1 2,414,602 + AO356_10605 0.58 +0.3 2,414,602 + AO356_10605 0.58 -0.8 2,414,603 - AO356_10605 0.58 -0.8 2,415,199 + AO356_10605 0.75 +0.1 2,415,199 + AO356_10605 0.75 +0.5 2,415,199 + AO356_10605 0.75 -0.6 2,415,199 + AO356_10605 0.75 -0.4 2,415,200 - AO356_10605 0.75 -0.9 2,415,308 + AO356_10605 0.78 -0.7 2,415,308 + AO356_10605 0.78 -0.1 2,415,308 + AO356_10605 0.78 -0.0 2,415,308 + AO356_10605 0.78 -0.1 2,415,308 + AO356_10605 0.78 -0.1 2,415,308 + AO356_10605 0.78 +0.1 2,415,308 + AO356_10605 0.78 +0.4 2,415,308 + AO356_10605 0.78 +0.5 2,415,309 - AO356_10605 0.78 +0.5 2,415,484 + AO356_10605 0.83 -1.2 2,415,484 + AO356_10605 0.83 -1.6 2,415,484 + AO356_10605 0.83 +0.7 2,415,484 + AO356_10605 0.83 -0.4 2,415,484 + AO356_10605 0.83 -0.1 2,415,485 - AO356_10605 0.83 -0.9 2,415,752 - -0.8 2,415,811 + +1.1 2,415,812 - +0.7 2,415,812 - -0.2 2,415,812 - +0.2 2,415,812 - +0.4 2,415,812 - +0.7 2,415,928 + +0.0 2,415,929 - +1.4 2,415,929 - +0.7 2,415,929 - -0.2 2,415,929 - -0.6 2,416,043 + -0.1 2,416,044 - +0.7 2,416,044 - -0.2 2,416,044 - +0.2 2,416,061 - +0.9 2,416,061 - -0.3 2,416,395 + AO356_10610 0.59 -2.9 2,416,395 + AO356_10610 0.59 -0.7 2,416,396 - AO356_10610 0.60 -0.5 2,416,396 - AO356_10610 0.60 -0.2 2,416,396 - AO356_10610 0.60 +0.0 2,416,581 + -0.1 2,416,581 + +0.7 2,416,581 + -0.8 2,416,581 + -0.0 2,416,581 + -1.0 2,416,581 + +0.1 2,416,582 - +0.4 2,416,582 - -0.8 2,416,582 - +1.1 2,416,582 - +0.6 2,416,582 - -0.4 2,416,582 - +0.7 2,416,582 - +0.3
Or see this region's nucleotide sequence