Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3733

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,282,805	-		Rru_A3731	0.35	+1.4
4,282,952	-		Rru_A3731	0.56	-1.0
4,283,068	+		Rru_A3731	0.73	+0.8
4,283,068	+		Rru_A3731	0.73	+1.0
4,283,069	-		Rru_A3731	0.73	+0.2
4,283,094	+		Rru_A3731	0.77	+1.1
4,283,094	+		Rru_A3731	0.77	-0.0
4,283,098	+		Rru_A3731	0.77	+1.5
4,283,098	+		Rru_A3731	0.77	-0.0
4,283,098	+		Rru_A3731	0.77	-0.1
4,283,099	-		Rru_A3731	0.78	-2.0
4,283,184	+		Rru_A3731	0.90	-2.1
4,283,184	+		Rru_A3731	0.90	+1.3
4,283,184	+		Rru_A3731	0.90	+1.1
4,283,266	+				+1.1
4,283,269	-				-0.7
4,283,269	-				+0.5
4,283,673	+				+0.2
4,283,704	+				+0.6
4,283,704	+				+0.6
4,283,705	-				-0.1
4,283,766	+				+2.5
4,283,823	+		Rru_A3733	0.10	-0.0
4,283,824	-		Rru_A3733	0.10	+1.5
4,283,824	-		Rru_A3733	0.10	+0.6
4,283,938	+		Rru_A3733	0.31	+0.5
4,283,939	-		Rru_A3733	0.31	+0.9
4,283,939	-		Rru_A3733	0.31	-0.0
4,283,939	-		Rru_A3733	0.31	+0.7
4,283,939	-		Rru_A3733	0.31	-0.0
4,283,939	-		Rru_A3733	0.31	-0.0
4,283,939	-		Rru_A3733	0.31	+2.6
4,284,121	-		Rru_A3733	0.63	-0.0
4,284,187	-		Rru_A3733	0.75	+0.7
4,284,248	+		Rru_A3733	0.86	-0.0
4,284,248	+		Rru_A3733	0.86	-0.0
4,284,248	+		Rru_A3733	0.86	-0.0
4,284,249	-		Rru_A3733	0.86	+0.2
4,284,249	-		Rru_A3733	0.86	-0.0
4,284,249	-		Rru_A3733	0.86	+1.0
4,284,265	-		Rru_A3733	0.89	-0.0
4,284,323	-				-0.0
4,284,345	-				+0.6
4,284,375	+				+0.0
4,284,375	+				-0.0
4,284,376	-				+0.8
4,284,376	-				-0.3
4,284,376	-				+1.1
4,284,411	-				-0.3
4,284,411	-				-0.3
4,284,582	+		Rru_A3734	0.11	-1.2
4,284,808	-		Rru_A3734	0.37	-0.0
4,284,957	+		Rru_A3734	0.53	-0.0
4,284,957	+		Rru_A3734	0.53	-0.2
4,284,958	-		Rru_A3734	0.54	-0.0
4,284,958	-		Rru_A3734	0.54	-0.0
4,284,958	-		Rru_A3734	0.54	-1.0
4,284,958	-		Rru_A3734	0.54	-0.0
4,285,098	+		Rru_A3734	0.69	+0.2
4,285,099	-		Rru_A3734	0.70	-0.0
4,285,099	-		Rru_A3734	0.70	-1.5
4,285,099	-		Rru_A3734	0.70	-0.1
4,285,227	+		Rru_A3734	0.84	-0.3
4,285,270	-		Rru_A3734	0.89	-1.2