Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3717

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,266,431	+		Rru_A3715	0.89	-0.0
4,266,431	+		Rru_A3715	0.89	-0.5
4,266,431	+		Rru_A3715	0.89	-0.0
4,266,431	+		Rru_A3715	0.89	-0.1
4,266,432	-		Rru_A3715	0.89	+1.4
4,266,432	-		Rru_A3715	0.89	+0.4
4,266,432	-		Rru_A3715	0.89	-0.0
4,266,432	-		Rru_A3715	0.89	-0.0
4,266,488	+				-1.0
4,266,623	+				-0.8
4,266,624	-				+0.4
4,266,624	-				-1.0
4,266,626	+				+0.5
4,266,626	+				-1.0
4,266,626	+				-0.5
4,266,627	-				-1.1
4,266,627	-				-0.7
4,266,627	-				-1.0
4,266,627	-				-0.0
4,266,627	-				-1.1
4,266,627	-				-0.0
4,266,627	-				-0.0
4,266,627	-				-1.0
4,266,800	-		Rru_A3716	0.21	+0.9
4,266,800	-		Rru_A3716	0.21	-0.0
4,266,836	-		Rru_A3716	0.26	-0.0
4,267,164	+		Rru_A3716	0.71	+0.4
4,267,322	-				-0.4
4,267,360	+				+0.5
4,267,361	-				+0.2
4,267,361	-				-1.0
4,267,361	-				-0.0
4,267,361	-				-0.0
4,267,362	+				+0.6
4,267,362	+				+0.4
4,267,362	+				+1.2
4,267,362	+				+1.1
4,267,363	-				+0.7
4,267,419	+				-0.0
4,267,419	+				-0.2
4,267,420	-				+0.4
4,267,435	-				+0.3
4,267,503	+		Rru_A3717	0.17	-0.0
4,267,503	+		Rru_A3717	0.17	+0.2
4,267,503	+		Rru_A3717	0.17	-0.0
4,267,504	-		Rru_A3717	0.17	+1.0
4,268,363	+		Rru_A3718	0.15	-0.0
4,268,364	-		Rru_A3718	0.15	+0.5
4,268,364	-		Rru_A3718	0.15	-0.4
4,268,364	-		Rru_A3718	0.15	-0.0
4,268,365	+		Rru_A3718	0.15	+0.2
4,268,365	+		Rru_A3718	0.15	-0.6
4,268,365	+		Rru_A3718	0.15	+1.0
4,268,365	+		Rru_A3718	0.15	-0.0
4,268,365	+		Rru_A3718	0.15	-0.1
4,268,366	-		Rru_A3718	0.15	-0.6
4,268,366	-		Rru_A3718	0.15	+0.6
4,268,366	-		Rru_A3718	0.15	-0.0
4,268,366	-		Rru_A3718	0.15	-0.0
4,268,366	-		Rru_A3718	0.15	-0.0
4,268,366	-		Rru_A3718	0.15	+0.3
4,268,366	-		Rru_A3718	0.15	-0.0
4,268,366	-		Rru_A3718	0.15	-0.0
4,268,387	+		Rru_A3718	0.17	+1.1
4,268,388	-		Rru_A3718	0.17	-0.2
4,268,388	-		Rru_A3718	0.17	+0.0
4,268,390	+		Rru_A3718	0.17	+0.6
4,268,390	+		Rru_A3718	0.17	-0.9
4,268,390	+		Rru_A3718	0.17	-0.0
4,268,391	-		Rru_A3718	0.17	-1.0
4,268,391	-		Rru_A3718	0.17	-0.2
4,268,391	-		Rru_A3718	0.17	-1.0
4,268,391	-		Rru_A3718	0.17	+0.1
4,268,391	-		Rru_A3718	0.17	-0.0
4,268,391	-		Rru_A3718	0.17	-1.0
4,268,471	+		Rru_A3718	0.23	-0.0
4,268,586	-		Rru_A3718	0.31	-0.1
4,268,611	-		Rru_A3718	0.33	-0.7