Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3711

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,260,387	-				+0.6
4,260,406	+				-0.0
4,260,406	+				-0.0
4,260,407	-				-0.0
4,260,600	-		Rru_A3710	0.33	+0.4
4,260,660	+		Rru_A3710	0.42	+0.3
4,260,674	+		Rru_A3710	0.44	+0.4
4,260,684	-		Rru_A3710	0.46	-1.6
4,260,712	-		Rru_A3710	0.50	+0.5
4,260,713	+		Rru_A3710	0.50	-0.0
4,260,713	+		Rru_A3710	0.50	+0.8
4,260,713	+		Rru_A3710	0.50	+0.1
4,260,713	+		Rru_A3710	0.50	-0.2
4,260,713	+		Rru_A3710	0.50	-0.0
4,260,713	+		Rru_A3710	0.50	-0.0
4,260,714	-		Rru_A3710	0.50	-0.0
4,260,714	-		Rru_A3710	0.50	+0.5
4,260,714	-		Rru_A3710	0.50	-1.6
4,260,714	-		Rru_A3710	0.50	-0.7
4,260,714	-		Rru_A3710	0.50	+0.2
4,260,714	-		Rru_A3710	0.50	+0.6
4,260,714	-		Rru_A3710	0.50	-1.0
4,260,714	-		Rru_A3710	0.50	-0.4
4,260,714	-		Rru_A3710	0.50	-0.0
4,260,828	-		Rru_A3710	0.67	-0.0
4,260,917	+		Rru_A3710	0.81	-0.0
4,260,933	+		Rru_A3710	0.83	+0.8
4,261,047	-				+1.7
4,261,121	+				-0.1
4,261,121	+				-0.0
4,261,122	-				+1.3
4,261,122	-				-0.0
4,261,551	+		Rru_A3711	0.48	-0.0
4,261,551	+		Rru_A3711	0.48	-1.0
4,261,551	+		Rru_A3711	0.48	-1.0
4,261,551	+		Rru_A3711	0.48	-0.0
4,261,552	-		Rru_A3711	0.48	+1.4
4,261,552	-		Rru_A3711	0.48	-0.0
4,261,552	-		Rru_A3711	0.48	+0.7
4,261,552	-		Rru_A3711	0.48	-0.0
4,261,725	+		Rru_A3711	0.67	-0.0
4,261,726	-		Rru_A3711	0.67	+1.2
4,261,726	-		Rru_A3711	0.67	-0.0
4,261,726	-		Rru_A3711	0.67	-0.0
4,261,943	-		Rru_A3711	0.90	-0.0
4,262,044	-				+1.0
4,262,044	-				-0.0
4,262,044	-				-0.0
4,262,093	+				-1.0
4,262,093	+				+1.2
4,262,406	+				-1.0
4,262,406	+				-0.2
4,262,447	+				+0.7
4,262,447	+				+0.6
4,262,448	-				-0.0
4,262,448	-				-0.0
4,262,448	-				-0.0
4,262,448	-				-1.0
4,262,452	+				+0.3
4,262,453	-				+1.6
4,262,453	-				+1.0
4,262,528	-				-0.0
4,262,747	+		Rru_A3712	0.39	-1.0
4,262,747	+		Rru_A3712	0.39	-0.0
4,262,770	+		Rru_A3712	0.42	-0.0
4,262,770	+		Rru_A3712	0.42	-1.0
4,262,770	+		Rru_A3712	0.42	-0.0
4,262,771	-		Rru_A3712	0.42	+1.4
4,262,993	+		Rru_A3712	0.77	-0.0
4,262,993	+		Rru_A3712	0.77	+1.4
4,262,993	+		Rru_A3712	0.77	+0.3
4,262,994	-		Rru_A3712	0.78	-0.0
4,262,994	-		Rru_A3712	0.78	-0.0
4,262,994	-		Rru_A3712	0.78	-0.0