Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3706
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
4,256,092 | + | -0.3 | |||
4,256,092 | + | -0.0 | |||
4,256,092 | + | -0.0 | |||
4,256,093 | - | +0.7 | |||
4,256,093 | - | -0.0 | |||
4,256,094 | + | -0.0 | |||
4,256,094 | + | -0.0 | |||
4,256,094 | + | -0.0 | |||
4,256,094 | + | -0.0 | |||
4,256,094 | + | -0.0 | |||
4,256,095 | - | +2.4 | |||
4,256,095 | - | +2.4 | |||
4,256,530 | - | Rru_A3706 | 0.40 | -0.0 | |
4,256,530 | - | Rru_A3706 | 0.40 | +1.5 | |
4,256,530 | - | Rru_A3706 | 0.40 | +1.8 | |
4,256,542 | - | Rru_A3706 | 0.41 | +1.6 | |
4,256,542 | - | Rru_A3706 | 0.41 | +1.2 | |
4,256,542 | - | Rru_A3706 | 0.41 | -0.0 | |
4,256,776 | - | Rru_A3706 | 0.58 | +2.2 | |
4,256,785 | - | Rru_A3706 | 0.59 | +1.2 | |
4,256,785 | - | Rru_A3706 | 0.59 | +2.2 | |
4,256,863 | - | Rru_A3706 | 0.65 | +1.2 | |
4,256,863 | - | Rru_A3706 | 0.65 | -0.0 | |
4,256,863 | - | Rru_A3706 | 0.65 | +1.8 | |
4,256,863 | - | Rru_A3706 | 0.65 | +1.0 | |
4,256,863 | - | Rru_A3706 | 0.65 | +0.9 | |
4,256,863 | - | Rru_A3706 | 0.65 | +1.3 | |
4,257,252 | - | -0.0 |
Or see this region's nucleotide sequence