Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3705

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,252,496	+		Rru_A3704	0.12	-1.0
4,252,497	-		Rru_A3704	0.12	-0.0
4,252,497	-		Rru_A3704	0.12	-0.0
4,252,497	-		Rru_A3704	0.12	-0.0
4,252,497	-		Rru_A3704	0.12	-0.5
4,252,500	-		Rru_A3704	0.12	-0.0
4,252,500	-		Rru_A3704	0.12	-1.0
4,252,584	+		Rru_A3704	0.21	-1.0
4,252,854	+		Rru_A3704	0.49	-0.0
4,252,855	-		Rru_A3704	0.49	-0.0
4,252,911	+		Rru_A3704	0.55	-1.0
4,252,912	-		Rru_A3704	0.55	-0.0
4,252,912	-		Rru_A3704	0.55	-0.0
4,253,034	+		Rru_A3704	0.68	-0.0
4,253,049	+		Rru_A3704	0.70	-0.0
4,253,049	+		Rru_A3704	0.70	-0.0
4,253,050	-		Rru_A3704	0.70	-0.0
4,253,057	+		Rru_A3704	0.71	-1.0
4,253,057	+		Rru_A3704	0.71	-1.6
4,253,057	+		Rru_A3704	0.71	-0.0
4,253,058	-		Rru_A3704	0.71	-0.0
4,253,058	-		Rru_A3704	0.71	-0.0
4,253,280	+				-0.0
4,253,280	+				-0.0
4,253,280	+				-0.0
4,253,281	-				-1.0
4,253,334	+				+0.9
4,253,398	+				-0.0
4,253,399	-				+0.8
4,253,419	+				+2.0
4,253,527	+				-0.0
4,253,528	-				-0.7
4,253,528	-				-0.0
4,253,605	+				+1.6
4,253,692	+		Rru_A3705	0.12	-1.2
4,253,692	+		Rru_A3705	0.12	-1.0
4,256,092	+				-0.3
4,256,092	+				-0.0
4,256,092	+				-0.0
4,256,093	-				+0.7
4,256,093	-				-0.0
4,256,094	+				-0.0
4,256,094	+				-0.0
4,256,094	+				-0.0
4,256,094	+				-0.0
4,256,094	+				-0.0
4,256,095	-				+2.4
4,256,095	-				+2.4
4,256,530	-		Rru_A3706	0.40	-0.0
4,256,530	-		Rru_A3706	0.40	+1.5
4,256,530	-		Rru_A3706	0.40	+1.8
4,256,542	-		Rru_A3706	0.41	+1.6
4,256,542	-		Rru_A3706	0.41	+1.2
4,256,542	-		Rru_A3706	0.41	-0.0
4,256,776	-		Rru_A3706	0.58	+2.2
4,256,785	-		Rru_A3706	0.59	+1.2
4,256,785	-		Rru_A3706	0.59	+2.2
4,256,863	-		Rru_A3706	0.65	+1.2
4,256,863	-		Rru_A3706	0.65	-0.0
4,256,863	-		Rru_A3706	0.65	+1.8
4,256,863	-		Rru_A3706	0.65	+1.0
4,256,863	-		Rru_A3706	0.65	+0.9
4,256,863	-		Rru_A3706	0.65	+1.3