Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3701

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,248,877	+		Rru_A3700	0.22	-0.0
4,248,877	+		Rru_A3700	0.22	+0.1
4,248,877	+		Rru_A3700	0.22	-0.0
4,248,877	+		Rru_A3700	0.22	-1.0
4,248,878	-		Rru_A3700	0.22	-0.0
4,248,878	-		Rru_A3700	0.22	-0.0
4,248,878	-		Rru_A3700	0.22	-0.0
4,248,901	+		Rru_A3700	0.24	-0.0
4,248,901	+		Rru_A3700	0.24	-1.6
4,248,901	+		Rru_A3700	0.24	-1.0
4,248,902	-		Rru_A3700	0.24	-0.0
4,248,902	-		Rru_A3700	0.24	-1.0
4,248,902	-		Rru_A3700	0.24	-1.0
4,249,035	-		Rru_A3700	0.35	-0.0
4,249,059	-		Rru_A3700	0.37	-0.0
4,249,222	+		Rru_A3700	0.52	-0.0
4,249,222	+		Rru_A3700	0.52	-0.0
4,249,223	-		Rru_A3700	0.52	-0.0
4,249,223	-		Rru_A3700	0.52	-0.0
4,249,223	-		Rru_A3700	0.52	-1.0
4,249,223	-		Rru_A3700	0.52	-0.0
4,249,326	-		Rru_A3700	0.61	-1.6
4,249,706	+				-0.0
4,249,706	+				+0.8
4,249,778	+				-0.0
4,249,779	-				-1.6
4,249,779	-				-0.0
4,249,779	-				-0.0
4,249,779	-				-1.0
4,249,866	-		Rru_A3701	0.10	-0.0
4,249,866	-		Rru_A3701	0.10	-0.3
4,249,866	-		Rru_A3701	0.10	-0.0
4,249,897	+		Rru_A3701	0.16	-0.0
4,249,897	+		Rru_A3701	0.16	-2.0
4,249,897	+		Rru_A3701	0.16	-3.5
4,249,897	+		Rru_A3701	0.16	-0.0
4,249,897	+		Rru_A3701	0.16	-1.0
4,249,898	-		Rru_A3701	0.16	-0.0
4,250,132	+		Rru_A3701	0.60	-1.0
4,250,132	+		Rru_A3701	0.60	-1.0
4,250,133	-		Rru_A3701	0.60	-0.0
4,250,135	+		Rru_A3701	0.61	-3.5
4,250,192	-		Rru_A3701	0.71	-0.6
4,250,192	-		Rru_A3701	0.71	+0.3
4,250,217	-		Rru_A3701	0.76	+0.0
4,250,383	+				+1.0
4,250,517	+				+2.0
4,250,517	+				-0.0