Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3675

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,221,828	+		Rru_A3673	0.80	+0.5
4,221,828	+		Rru_A3673	0.80	-0.5
4,221,828	+		Rru_A3673	0.80	-0.0
4,221,829	-		Rru_A3673	0.80	-0.0
4,221,834	+		Rru_A3673	0.80	+0.1
4,221,834	+		Rru_A3673	0.80	-0.7
4,221,835	-		Rru_A3673	0.80	-0.0
4,221,927	+		Rru_A3673	0.88	+2.5
4,221,927	+		Rru_A3673	0.88	-0.0
4,221,928	-		Rru_A3673	0.89	-0.0
4,221,948	+				-0.0
4,221,948	+				+0.0
4,221,948	+				+0.7
4,222,191	+				+0.6
4,222,191	+				-0.0
4,222,192	-				+1.5
4,222,192	-				-0.0
4,222,220	-				-0.0
4,222,503	-				-0.0
4,222,504	+				-1.0
4,222,546	+				-0.0
4,222,841	-		Rru_A3675	0.37	+0.5
4,222,975	+		Rru_A3675	0.57	-0.0
4,222,975	+		Rru_A3675	0.57	-0.7
4,222,976	-		Rru_A3675	0.57	-0.0
4,222,979	+		Rru_A3675	0.57	+0.2
4,222,979	+		Rru_A3675	0.57	-1.0
4,222,979	+		Rru_A3675	0.57	-0.0
4,222,979	+		Rru_A3675	0.57	-0.0
4,222,979	+		Rru_A3675	0.57	+0.7
4,222,979	+		Rru_A3675	0.57	-0.0
4,222,979	+		Rru_A3675	0.57	-0.0
4,222,979	+		Rru_A3675	0.57	+2.0
4,222,979	+		Rru_A3675	0.57	-0.5
4,222,980	-		Rru_A3675	0.57	-0.5
4,222,980	-		Rru_A3675	0.57	+0.8
4,222,980	-		Rru_A3675	0.57	-0.0
4,222,981	+		Rru_A3675	0.58	-0.5
4,223,045	+		Rru_A3675	0.67	+0.8
4,223,045	+		Rru_A3675	0.67	+0.3
4,223,045	+		Rru_A3675	0.67	+0.1
4,223,046	-		Rru_A3675	0.67	+1.0
4,223,047	+		Rru_A3675	0.68	-0.0
4,223,047	+		Rru_A3675	0.68	+1.2
4,223,047	+		Rru_A3675	0.68	-1.4
4,223,048	-		Rru_A3675	0.68	-0.0
4,223,170	+		Rru_A3675	0.86	-0.8
4,223,392	-				-0.0
4,223,439	+				-0.0
4,223,440	-				+0.2
4,223,538	+		Rru_A3676	0.12	-1.6
4,223,538	+		Rru_A3676	0.12	-0.8
4,223,539	-		Rru_A3676	0.12	+0.5
4,223,539	-		Rru_A3676	0.12	+1.3
4,223,539	-		Rru_A3676	0.12	+0.7
4,223,539	-		Rru_A3676	0.12	+0.5
4,223,835	+		Rru_A3676	0.35	+0.0
4,223,835	+		Rru_A3676	0.35	-0.0
4,223,836	-		Rru_A3676	0.35	-0.6
4,223,836	-		Rru_A3676	0.35	-0.0
4,223,905	+		Rru_A3676	0.40	+0.1
4,223,905	+		Rru_A3676	0.40	-0.0
4,223,906	-		Rru_A3676	0.40	-0.0
4,223,906	-		Rru_A3676	0.40	+0.9
4,223,907	+		Rru_A3676	0.40	-0.0
4,223,934	+		Rru_A3676	0.42	+0.4
4,223,982	+		Rru_A3676	0.46	-0.9
4,223,982	+		Rru_A3676	0.46	-0.1
4,223,982	+		Rru_A3676	0.46	+0.7
4,223,983	-		Rru_A3676	0.46	-0.2
4,223,983	-		Rru_A3676	0.46	-0.0
4,224,082	-		Rru_A3676	0.54	-0.0
4,224,198	+		Rru_A3676	0.63	+0.2
4,224,198	+		Rru_A3676	0.63	+0.5
4,224,199	-		Rru_A3676	0.63	-0.0
4,224,199	-		Rru_A3676	0.63	-0.5
4,224,199	-		Rru_A3676	0.63	-0.0