Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3658
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
4,199,065 | + | -0.0 | |||
4,199,066 | - | +1.3 | |||
4,199,067 | + | -0.0 | |||
4,199,068 | - | -0.0 | |||
4,199,068 | - | -0.0 | |||
4,199,068 | - | -0.0 | |||
4,199,863 | - | Rru_A3658 | 0.66 | -0.0 | |
4,200,562 | - | Rru_A3659 | 0.19 | -0.0 | |
4,200,635 | + | Rru_A3659 | 0.24 | -0.0 | |
4,200,635 | + | Rru_A3659 | 0.24 | -0.6 | |
4,200,891 | - | Rru_A3659 | 0.40 | -0.0 | |
4,200,891 | - | Rru_A3659 | 0.40 | -0.0 | |
4,200,891 | - | Rru_A3659 | 0.40 | -0.1 | |
4,200,891 | - | Rru_A3659 | 0.40 | -0.0 | |
4,200,891 | - | Rru_A3659 | 0.40 | -0.0 | |
4,201,112 | + | Rru_A3659 | 0.54 | -0.0 |
Or see this region's nucleotide sequence