Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3574

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,117,243	+				+0.7
4,117,243	+				-0.3
4,117,243	+				+1.0
4,117,244	-				+0.7
4,117,244	-				+2.4
4,117,271	+				-0.0
4,117,367	+				+1.5
4,117,367	+				-0.2
4,117,368	-				+0.6
4,117,419	+		Rru_A3572	0.27	+0.1
4,117,420	-		Rru_A3572	0.27	+0.6
4,117,557	+		Rru_A3572	0.74	+2.8
4,117,557	+		Rru_A3572	0.74	-0.3
4,117,558	-		Rru_A3572	0.75	-0.0
4,117,599	+		Rru_A3572	0.89	-0.0
4,117,599	+		Rru_A3572	0.89	-0.5
4,117,599	+		Rru_A3572	0.89	-0.0
4,117,600	-		Rru_A3572	0.89	-0.0
4,117,600	-		Rru_A3572	0.89	-0.0
4,117,601	+		Rru_A3572	0.89	-1.6
4,117,601	+		Rru_A3572	0.89	-1.0
4,117,641	+				+0.1
4,117,641	+				-0.3
4,117,641	+				+1.0
4,117,642	-				+0.3
4,117,642	-				+0.4
4,117,642	-				+0.7
4,117,857	+		Rru_A3573	0.49	-0.0
4,118,061	+				-0.0
4,118,061	+				-0.4
4,118,283	+		Rru_A3574	0.61	-0.0
4,118,283	+		Rru_A3574	0.61	-0.0
4,118,283	+		Rru_A3574	0.61	-0.4
4,118,283	+		Rru_A3574	0.61	-0.5
4,118,283	+		Rru_A3574	0.61	-0.0
4,118,283	+		Rru_A3574	0.61	-0.0
4,118,284	-		Rru_A3574	0.61	-0.0
4,118,284	-		Rru_A3574	0.61	+0.4
4,118,284	-		Rru_A3574	0.61	+0.3
4,118,448	-				+0.4
4,118,448	-				-0.0
4,118,483	+				-0.3
4,118,484	-				+1.1
4,118,484	-				-1.0
4,118,505	+				-0.0
4,118,505	+				-0.1
4,118,505	+				+0.5
4,118,506	-				+0.8
4,118,506	-				+1.1
4,118,506	-				-1.0
4,118,506	-				-0.0
4,118,506	-				-0.0
4,118,577	+				-0.0
4,118,577	+				+0.4
4,118,578	-				-1.0
4,118,589	+				+0.9
4,118,590	-				-0.0
4,118,590	-				+0.7
4,118,590	-				+0.6
4,118,835	+		Rru_A3575	0.17	+0.8
4,118,919	+		Rru_A3575	0.21	+0.7
4,118,919	+		Rru_A3575	0.21	-0.0
4,118,919	+		Rru_A3575	0.21	+1.9
4,118,920	-		Rru_A3575	0.21	+0.5
4,118,920	-		Rru_A3575	0.21	+0.2
4,118,920	-		Rru_A3575	0.21	+0.7
4,119,289	-		Rru_A3575	0.40	+1.0
4,119,289	-		Rru_A3575	0.40	-0.0
4,119,329	+		Rru_A3575	0.42	+0.6
4,119,329	+		Rru_A3575	0.42	+1.1
4,119,329	+		Rru_A3575	0.42	-0.0
4,119,329	+		Rru_A3575	0.42	+0.7
4,119,330	-		Rru_A3575	0.42	+0.1
4,119,351	+		Rru_A3575	0.43	-0.0
4,119,352	-		Rru_A3575	0.43	+1.5
4,119,352	-		Rru_A3575	0.43	+0.8
4,119,352	-		Rru_A3575	0.43	+0.4
4,119,352	-		Rru_A3575	0.43	+0.2
4,119,372	+		Rru_A3575	0.45	+1.7
4,119,372	+		Rru_A3575	0.45	-1.0
4,119,372	+		Rru_A3575	0.45	+1.3
4,119,372	+		Rru_A3575	0.45	-0.7
4,119,373	-		Rru_A3575	0.45	+2.8
4,119,373	-		Rru_A3575	0.45	+1.0
4,119,373	-		Rru_A3575	0.45	+0.7
4,119,384	+		Rru_A3575	0.45	+2.0
4,119,402	+		Rru_A3575	0.46	+0.7
4,119,402	+		Rru_A3575	0.46	-0.3