Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3550

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,088,730	+		Rru_A3549	0.42	-0.0
4,088,731	-		Rru_A3549	0.42	-1.0
4,088,731	-		Rru_A3549	0.42	-1.6
4,089,451	+		Rru_A3549	0.89	-3.2
4,089,451	+		Rru_A3549	0.89	-4.3
4,089,452	-		Rru_A3549	0.89	-1.4
4,089,452	-		Rru_A3549	0.89	-1.0
4,089,454	-		Rru_A3549	0.89	-1.0
4,089,770	-				-0.0
4,089,771	+				-0.0
4,089,772	-				+1.0
4,089,772	-				-0.2
4,090,155	+		Rru_A3550	0.34	-0.0
4,090,155	+		Rru_A3550	0.34	-2.4
4,090,156	-		Rru_A3550	0.34	-1.0
4,090,287	+		Rru_A3550	0.42	-0.7
4,090,287	+		Rru_A3550	0.42	-0.0
4,090,287	+		Rru_A3550	0.42	-0.0
4,090,553	+		Rru_A3550	0.59	-0.0
4,091,002	+		Rru_A3550	0.89	-0.0
4,091,002	+		Rru_A3550	0.89	-0.8
4,091,003	-		Rru_A3550	0.89	-1.0
4,091,248	-				+0.3
4,091,480	+		Rru_A3551	0.26	-0.0
4,091,487	-		Rru_A3551	0.27	-0.2
4,091,487	-		Rru_A3551	0.27	+0.1
4,091,487	-		Rru_A3551	0.27	+0.0
4,091,579	+		Rru_A3551	0.37	-0.0
4,091,580	-		Rru_A3551	0.37	-0.2
4,091,778	-		Rru_A3551	0.59	+0.2
4,091,807	+		Rru_A3551	0.62	-0.0
4,091,808	-		Rru_A3551	0.63	-0.0
4,091,808	-		Rru_A3551	0.63	+0.5
4,091,847	-		Rru_A3551	0.67	-0.3
4,092,163	-				+0.6