Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3541

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,073,060	+				-0.0
4,073,060	+				+1.0
4,073,060	+				-0.0
4,073,060	+				-0.0
4,073,060	+				-1.0
4,073,060	+				+0.4
4,073,060	+				+0.4
4,073,061	-				-0.0
4,073,061	-				-1.0
4,073,061	-				-0.8
4,073,061	-				-0.0
4,073,062	+				+0.6
4,073,062	+				+0.4
4,073,062	+				+0.6
4,073,062	+				-0.0
4,073,063	-				-0.4
4,073,063	-				-0.0
4,073,063	-				+0.4
4,073,063	-				+0.9
4,073,063	-				-0.0
4,073,113	-				-1.0
4,073,182	+				+0.6
4,073,182	+				+0.9
4,073,182	+				-2.0
4,073,182	+				+0.6
4,073,182	+				-0.0
4,073,182	+				+0.7
4,073,183	-				-0.0
4,073,183	-				+0.6
4,073,183	-				+0.5
4,073,183	-				-0.6
4,073,183	-				-0.4
4,073,183	-				-0.7
4,073,183	-				-0.0
4,073,192	-				+0.6
4,073,376	+		Rru_A3540	0.37	-0.0
4,073,377	-		Rru_A3540	0.38	-0.0
4,073,377	-		Rru_A3540	0.38	-0.2
4,073,377	-		Rru_A3540	0.38	-0.4
4,073,382	-		Rru_A3540	0.39	+0.1
4,073,634	+				-0.0
4,073,707	+				-0.0
4,074,043	+		Rru_A3541	0.10	+0.3
4,074,169	+		Rru_A3541	0.15	+1.3
4,074,250	+		Rru_A3541	0.18	+0.3
4,074,250	+		Rru_A3541	0.18	-0.0
4,074,250	+		Rru_A3541	0.18	+0.7
4,074,250	+		Rru_A3541	0.18	-0.0
4,074,251	-		Rru_A3541	0.18	+0.8
4,074,251	-		Rru_A3541	0.18	+0.2
4,074,497	+		Rru_A3541	0.27	+1.0
4,074,506	+		Rru_A3541	0.27	-0.0
4,074,506	+		Rru_A3541	0.27	-1.0
4,074,648	-		Rru_A3541	0.32	+0.1
4,074,668	-		Rru_A3541	0.33	+0.4
4,074,958	+		Rru_A3541	0.43	-0.0
4,074,974	+		Rru_A3541	0.44	+0.6
4,074,974	+		Rru_A3541	0.44	-0.0
4,074,975	-		Rru_A3541	0.44	+1.4
4,074,975	-		Rru_A3541	0.44	-0.4
4,074,975	-		Rru_A3541	0.44	-0.5
4,074,975	-		Rru_A3541	0.44	+1.6
4,074,975	-		Rru_A3541	0.44	+1.2
4,075,015	+		Rru_A3541	0.45	+0.4
4,075,015	+		Rru_A3541	0.45	+0.5
4,075,016	-		Rru_A3541	0.45	+1.0
4,075,090	+		Rru_A3541	0.48	-0.0
4,075,670	-		Rru_A3541	0.69	-0.0
4,075,670	-		Rru_A3541	0.69	+0.4
4,076,011	+		Rru_A3541	0.81	+0.8
4,076,011	+		Rru_A3541	0.81	-0.0
4,076,011	+		Rru_A3541	0.81	-0.0
4,076,011	+		Rru_A3541	0.81	+0.7
4,076,011	+		Rru_A3541	0.81	+1.4
4,076,012	-		Rru_A3541	0.81	-0.3
4,076,012	-		Rru_A3541	0.81	+0.5
4,076,012	-		Rru_A3541	0.81	+1.3
4,076,012	-		Rru_A3541	0.81	+0.1
4,076,012	-		Rru_A3541	0.81	-0.0
4,076,016	-		Rru_A3541	0.81	-0.0
4,076,016	-		Rru_A3541	0.81	-0.4
4,076,099	+		Rru_A3541	0.84	-0.0
4,076,100	-		Rru_A3541	0.84	-0.9
4,076,101	+		Rru_A3541	0.84	-0.0
4,076,188	+		Rru_A3541	0.87	+1.7
4,076,188	+		Rru_A3541	0.87	+1.6
4,076,228	+		Rru_A3541	0.89	+1.6
4,076,314	+				+1.5
4,076,375	-				-0.0
4,076,542	-				-0.0
4,076,651	-				+0.3
4,076,665	+				+1.3
4,076,666	-				-0.0
4,076,676	-				-0.0
4,076,680	+				+1.5
4,076,706	+				+1.6
4,076,838	-				+1.0
4,077,033	-				+0.5
4,077,089	+				-0.0
4,077,095	+				+0.8
4,077,096	-				-0.0
4,077,097	+				+1.1
4,077,112	+				+0.4
4,077,113	-				-2.3