Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3512
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
4,042,553 | + | +0.7 | |||
4,042,554 | - | -0.0 | |||
4,042,678 | + | Rru_A3512 | 0.12 | -1.0 | |
4,042,679 | - | Rru_A3512 | 0.13 | -1.0 | |
4,042,756 | + | Rru_A3512 | 0.23 | +0.9 | |
4,042,771 | + | Rru_A3512 | 0.25 | -0.0 | |
4,042,772 | - | Rru_A3512 | 0.25 | +2.1 | |
4,042,888 | + | Rru_A3512 | 0.41 | +0.3 | |
4,042,889 | - | Rru_A3512 | 0.41 | +0.5 | |
4,042,889 | - | Rru_A3512 | 0.41 | -0.0 | |
4,043,004 | + | Rru_A3512 | 0.57 | -0.0 | |
4,043,004 | + | Rru_A3512 | 0.57 | -0.0 | |
4,043,326 | - | -0.0 |
Or see this region's nucleotide sequence