Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3509

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,035,654	+				-1.6
4,035,654	+				-0.0
4,035,745	+		Rru_A3508	0.10	-0.0
4,035,746	-		Rru_A3508	0.10	+0.1
4,035,762	+		Rru_A3508	0.12	-0.0
4,036,071	+		Rru_A3508	0.47	-0.0
4,036,072	-		Rru_A3508	0.47	-0.0
4,036,075	-		Rru_A3508	0.47	+0.3
4,036,090	+		Rru_A3508	0.49	-0.0
4,036,091	-		Rru_A3508	0.49	-0.0
4,036,091	-		Rru_A3508	0.49	-0.0
4,036,119	+		Rru_A3508	0.52	-0.0
4,036,120	-		Rru_A3508	0.52	-0.0
4,036,456	-		Rru_A3508	0.90	-0.4
4,036,456	-		Rru_A3508	0.90	-0.0
4,036,456	-		Rru_A3508	0.90	-0.0
4,036,488	+				+1.2
4,036,489	-				+0.7
4,036,627	-				+0.7
4,036,696	-				+1.8
4,036,696	-				-1.0
4,036,740	+				-0.0
4,036,740	+				-0.0
4,036,776	-				-0.0
4,036,799	+				-0.3
4,036,799	+				+0.1
4,036,800	-				+0.6
4,036,800	-				-0.0
4,036,955	+		Rru_A3509	0.16	-0.0
4,036,955	+		Rru_A3509	0.16	-0.0
4,036,955	+		Rru_A3509	0.16	+0.5
4,036,955	+		Rru_A3509	0.16	-0.5
4,036,955	+		Rru_A3509	0.16	-0.0
4,036,955	+		Rru_A3509	0.16	+0.9
4,036,955	+		Rru_A3509	0.16	+1.5
4,036,955	+		Rru_A3509	0.16	-0.0
4,036,956	-		Rru_A3509	0.16	-0.1
4,036,956	-		Rru_A3509	0.16	-0.6
4,036,956	-		Rru_A3509	0.16	-0.0
4,037,064	-		Rru_A3509	0.22	+0.5
4,037,432	+		Rru_A3509	0.41	-0.0
4,037,432	+		Rru_A3509	0.41	+0.2
4,037,432	+		Rru_A3509	0.41	-2.6
4,037,432	+		Rru_A3509	0.41	+0.7
4,037,432	+		Rru_A3509	0.41	-0.0
4,037,432	+		Rru_A3509	0.41	+0.6
4,037,433	-		Rru_A3509	0.41	+0.5
4,037,433	-		Rru_A3509	0.41	-0.0
4,037,433	-		Rru_A3509	0.41	-0.0
4,037,460	-		Rru_A3509	0.42	-0.0
4,037,460	-		Rru_A3509	0.42	+1.5
4,037,843	+		Rru_A3509	0.61	+0.4
4,037,843	+		Rru_A3509	0.61	+0.4
4,037,844	-		Rru_A3509	0.62	+1.1
4,037,844	-		Rru_A3509	0.62	+0.4
4,037,844	-		Rru_A3509	0.62	-1.0
4,037,844	-		Rru_A3509	0.62	-0.1
4,037,844	-		Rru_A3509	0.62	+0.2
4,037,885	+		Rru_A3509	0.64	-0.0
4,037,885	+		Rru_A3509	0.64	-0.9
4,037,885	+		Rru_A3509	0.64	-1.0
4,037,885	+		Rru_A3509	0.64	+0.6
4,037,886	-		Rru_A3509	0.64	+0.7
4,037,886	-		Rru_A3509	0.64	+0.3
4,037,886	-		Rru_A3509	0.64	-0.0
4,037,886	-		Rru_A3509	0.64	+0.2
4,037,886	-		Rru_A3509	0.64	-0.0
4,037,886	-		Rru_A3509	0.64	+0.4
4,037,886	-		Rru_A3509	0.64	-0.0
4,037,922	-		Rru_A3509	0.65	-2.0
4,037,922	-		Rru_A3509	0.65	+0.5
4,037,922	-		Rru_A3509	0.65	-0.0
4,037,922	-		Rru_A3509	0.65	+0.8
4,037,922	-		Rru_A3509	0.65	-0.0
4,038,047	+		Rru_A3509	0.72	-0.0
4,038,125	+		Rru_A3509	0.76	+0.5
4,038,125	+		Rru_A3509	0.76	-0.0
4,038,125	+		Rru_A3509	0.76	-0.0
4,038,126	-		Rru_A3509	0.76	+1.0
4,038,126	-		Rru_A3509	0.76	-0.0
4,038,126	-		Rru_A3509	0.76	-0.0
4,038,126	-		Rru_A3509	0.76	-0.0
4,038,126	-		Rru_A3509	0.76	-0.0
4,038,126	-		Rru_A3509	0.76	+1.0
4,038,152	+		Rru_A3509	0.77	-0.3
4,038,290	+		Rru_A3509	0.84	-0.0
4,038,290	+		Rru_A3509	0.84	-2.0
4,038,290	+		Rru_A3509	0.84	+0.9
4,038,290	+		Rru_A3509	0.84	-0.0
4,038,290	+		Rru_A3509	0.84	-1.0
4,038,291	-		Rru_A3509	0.84	-0.0
4,038,291	-		Rru_A3509	0.84	-0.0
4,038,291	-		Rru_A3509	0.84	+1.0
4,038,291	-		Rru_A3509	0.84	+0.3
4,038,291	-		Rru_A3509	0.84	-0.0
4,038,291	-		Rru_A3509	0.84	-0.0
4,038,391	+		Rru_A3509	0.89	-0.0
4,038,392	-		Rru_A3509	0.89	+1.3
4,038,392	-		Rru_A3509	0.89	+0.4
4,038,392	-		Rru_A3509	0.89	+1.3
4,038,392	-		Rru_A3509	0.89	-0.0
4,038,420	-				-1.0
4,038,420	-				+0.7
4,038,420	-				+0.1
4,038,566	+				+0.6
4,038,567	-				-0.1
4,038,749	+		Rru_A3510	0.18	-0.0
4,038,749	+		Rru_A3510	0.18	+0.2
4,038,758	+		Rru_A3510	0.19	-0.1
4,038,759	-		Rru_A3510	0.19	-0.2
4,038,905	+		Rru_A3510	0.37	-0.0
4,038,906	-		Rru_A3510	0.37	+0.4
4,039,063	+		Rru_A3510	0.56	+0.4
4,039,063	+		Rru_A3510	0.56	-0.0
4,039,063	+		Rru_A3510	0.56	-0.0
4,039,136	+		Rru_A3510	0.65	+0.6
4,039,136	+		Rru_A3510	0.65	-0.0
4,039,136	+		Rru_A3510	0.65	-0.0
4,039,136	+		Rru_A3510	0.65	-0.0
4,039,137	-		Rru_A3510	0.65	-0.0
4,039,137	-		Rru_A3510	0.65	-0.2
4,039,137	-		Rru_A3510	0.65	-0.0
4,039,137	-		Rru_A3510	0.65	+0.8
4,039,529	-				-0.0