Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3489

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,015,157	+				+0.1
4,015,158	-				+0.1
4,015,180	-				-0.5
4,015,214	+				+0.5
4,015,268	+		Rru_A3489	0.13	+0.3
4,015,268	+		Rru_A3489	0.13	+0.9
4,015,268	+		Rru_A3489	0.13	+1.2
4,015,269	-		Rru_A3489	0.13	-0.0
4,015,728	-		Rru_A3489	0.44	-1.0
4,015,728	-		Rru_A3489	0.44	-1.0
4,015,736	+		Rru_A3489	0.45	+0.1
4,015,736	+		Rru_A3489	0.45	+0.2
4,015,736	+		Rru_A3489	0.45	-0.0
4,015,737	-		Rru_A3489	0.45	-0.0
4,015,766	+		Rru_A3489	0.47	+0.2
4,015,766	+		Rru_A3489	0.47	+0.5
4,015,766	+		Rru_A3489	0.47	-0.7
4,015,766	+		Rru_A3489	0.47	-0.0
4,015,782	-		Rru_A3489	0.48	-0.0
4,016,144	+		Rru_A3489	0.73	+0.4
4,016,169	-		Rru_A3489	0.75	-0.8
4,016,172	-		Rru_A3489	0.75	+0.8
4,016,188	-		Rru_A3489	0.76	-0.0
4,016,327	+		Rru_A3489	0.86	+0.2
4,016,328	-		Rru_A3489	0.86	-1.6
4,016,524	-				+1.0
4,016,582	+				+0.0
4,016,583	-				+0.1
4,016,583	-				+1.0
4,016,583	-				-0.0
4,016,612	+				+1.4
4,016,612	+				-0.0
4,016,613	-				+0.5
4,016,689	+		Rru_A3490	0.13	-0.0
4,016,689	+		Rru_A3490	0.13	-0.0
4,016,805	+		Rru_A3490	0.26	+0.4
4,016,805	+		Rru_A3490	0.26	+0.4
4,016,830	+		Rru_A3490	0.29	-0.0
4,016,831	-		Rru_A3490	0.29	-0.0
4,016,831	-		Rru_A3490	0.29	-0.0
4,017,255	-		Rru_A3490	0.79	+0.5
4,017,255	-		Rru_A3490	0.79	+0.3
4,017,472	-				-0.0
4,017,475	+				-0.0
4,017,476	-				+0.2
4,017,476	-				-0.4
4,017,515	+				-0.0