Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3481

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
4,006,310	+		Rru_A3481	0.21	-1.0
4,006,311	-		Rru_A3481	0.22	-0.1
4,006,311	-		Rru_A3481	0.22	-0.5
4,006,311	-		Rru_A3481	0.22	+0.5
4,006,311	-		Rru_A3481	0.22	-0.0
4,006,421	+		Rru_A3481	0.40	-0.1
4,006,421	+		Rru_A3481	0.40	-0.0
4,006,422	-		Rru_A3481	0.40	-0.0
4,006,422	-		Rru_A3481	0.40	-0.0
4,006,496	+		Rru_A3481	0.53	-0.7
4,006,496	+		Rru_A3481	0.53	-0.0
4,006,496	+		Rru_A3481	0.53	-0.0
4,006,496	+		Rru_A3481	0.53	+0.3
4,006,496	+		Rru_A3481	0.53	-0.2
4,006,496	+		Rru_A3481	0.53	+0.4
4,006,496	+		Rru_A3481	0.53	-0.0
4,006,497	-		Rru_A3481	0.53	-0.0
4,006,497	-		Rru_A3481	0.53	-1.8
4,006,497	-		Rru_A3481	0.53	-1.6
4,006,515	-		Rru_A3481	0.56	-0.0
4,006,515	-		Rru_A3481	0.56	-0.0
4,006,515	-		Rru_A3481	0.56	-0.0
4,006,517	-		Rru_A3481	0.56	-0.0
4,006,517	-		Rru_A3481	0.56	-0.2
4,006,637	+		Rru_A3481	0.76	+0.0
4,006,637	+		Rru_A3481	0.76	+0.6
4,006,637	+		Rru_A3481	0.76	-0.5
4,006,638	-		Rru_A3481	0.76	+0.3
4,006,822	-				+0.1
4,006,897	+				-0.0
4,006,899	+				-0.0
4,006,903	+				-1.2
4,007,234	+		Rru_A3482	0.57	+0.2
4,007,234	+		Rru_A3482	0.57	+0.4
4,007,274	-		Rru_A3482	0.65	-0.0
4,007,274	-		Rru_A3482	0.65	+0.4
4,007,506	+				-0.0
4,007,506	+				-0.0
4,007,506	+				+0.1
4,007,506	+				-0.0
4,007,506	+				+0.1
4,007,506	+				-0.0
4,007,507	-				+0.5
4,007,509	-				+1.2
4,007,509	-				+1.5
4,007,571	+				-0.0
4,007,572	-				-2.0
4,007,572	-				+0.3
4,007,572	-				-0.0
4,007,635	+		Rru_A3483	0.12	+1.6
4,007,635	+		Rru_A3483	0.12	-0.3
4,007,635	+		Rru_A3483	0.12	-0.0
4,007,635	+		Rru_A3483	0.12	+0.3
4,007,635	+		Rru_A3483	0.12	-0.0
4,007,635	+		Rru_A3483	0.12	+0.2
4,007,635	+		Rru_A3483	0.12	-0.0
4,007,635	+		Rru_A3483	0.12	-0.5
4,007,636	-		Rru_A3483	0.12	+0.4
4,007,636	-		Rru_A3483	0.12	+0.9
4,007,636	-		Rru_A3483	0.12	+0.0
4,007,636	-		Rru_A3483	0.12	-0.0
4,007,637	+		Rru_A3483	0.12	+0.5
4,007,638	-		Rru_A3483	0.12	+0.9
4,007,638	-		Rru_A3483	0.12	-0.0
4,007,724	+		Rru_A3483	0.18	-0.0
4,007,724	+		Rru_A3483	0.18	+0.8
4,007,724	+		Rru_A3483	0.18	+1.4