Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3462

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,986,841	+		Rru_A3461	0.60	+2.3
3,986,842	-		Rru_A3461	0.61	+0.3
3,986,842	-		Rru_A3461	0.61	+1.4
3,986,842	-		Rru_A3461	0.61	-0.3
3,986,970	+		Rru_A3461	0.69	+1.2
3,986,970	+		Rru_A3461	0.69	+0.6
3,986,970	+		Rru_A3461	0.69	-0.0
3,986,970	+		Rru_A3461	0.69	-1.0
3,986,971	-		Rru_A3461	0.69	-0.0
3,986,971	-		Rru_A3461	0.69	+0.8
3,986,971	-		Rru_A3461	0.69	-0.0
3,986,971	-		Rru_A3461	0.69	+0.8
3,986,971	-		Rru_A3461	0.69	+0.1
3,986,971	-		Rru_A3461	0.69	+0.9
3,986,971	-		Rru_A3461	0.69	-1.0
3,987,006	+		Rru_A3461	0.71	+0.3
3,987,006	+		Rru_A3461	0.71	-0.1
3,987,099	+		Rru_A3461	0.77	-0.0
3,987,108	+		Rru_A3461	0.78	-0.0
3,987,109	-		Rru_A3461	0.78	-0.0
3,987,109	-		Rru_A3461	0.78	-0.0
3,987,109	-		Rru_A3461	0.78	-0.0
3,987,109	-		Rru_A3461	0.78	-0.0
3,987,304	-				-0.0
3,987,304	-				-0.0
3,987,304	-				-0.0
3,987,466	+				+0.7
3,987,466	+				+0.9
3,987,542	+				-0.0
3,987,572	+				-0.0
3,987,649	-				+0.6
3,987,660	+				-0.0
3,987,660	+				+1.8
3,987,661	-				-0.0
3,987,661	-				-0.0
3,987,662	+				-1.6
3,987,662	+				-0.1
3,987,662	+				-0.3
3,987,662	+				-0.0
3,987,662	+				-0.0
3,987,662	+				-0.0
3,987,662	+				+1.2
3,987,663	-				-0.2
3,987,663	-				-0.0
3,987,663	-				-0.2
3,987,663	-				-0.0
3,987,663	-				-0.0
3,987,663	-				-0.7
3,987,663	-				-0.3
3,987,682	+				-0.0
3,987,682	+				+0.6
3,987,705	+				-0.4
3,987,706	-				-1.0
3,987,706	-				-0.0
3,987,706	-				+0.0
3,987,720	+				-1.0
3,987,721	-				-0.2
3,987,721	-				+0.4
3,987,876	+		Rru_A3462	0.29	-0.2
3,987,876	+		Rru_A3462	0.29	-0.3
3,987,877	-		Rru_A3462	0.29	-0.6
3,987,877	-		Rru_A3462	0.29	-1.4
3,987,896	-		Rru_A3462	0.32	-0.8
3,987,956	-		Rru_A3462	0.41	-1.1
3,987,957	+		Rru_A3462	0.42	-0.0
3,987,958	-		Rru_A3462	0.42	-0.0
3,987,958	-		Rru_A3462	0.42	-0.7
3,987,958	-		Rru_A3462	0.42	-1.0
3,987,982	+		Rru_A3462	0.45	+0.6
3,988,204	+		Rru_A3462	0.81	+1.0
3,988,204	+		Rru_A3462	0.81	-1.0
3,988,204	+		Rru_A3462	0.81	-1.0
3,988,204	+		Rru_A3462	0.81	+1.0
3,988,204	+		Rru_A3462	0.81	+0.5
3,988,204	+		Rru_A3462	0.81	+0.6
3,988,205	-		Rru_A3462	0.81	-0.0
3,988,205	-		Rru_A3462	0.81	-0.0
3,988,205	-		Rru_A3462	0.81	-0.0
3,988,205	-		Rru_A3462	0.81	-0.3
3,988,205	-		Rru_A3462	0.81	+0.3
3,988,379	-				-0.4
3,988,500	+				-0.0
3,988,585	+				+0.5
3,988,586	-				-0.0
3,988,818	+		Rru_A3463	0.31	+0.0
3,988,818	+		Rru_A3463	0.31	-0.0
3,988,819	-		Rru_A3463	0.32	-0.1
3,988,819	-		Rru_A3463	0.32	-0.0
3,988,819	-		Rru_A3463	0.32	+0.5
3,988,867	+		Rru_A3463	0.48	-0.0
3,988,867	+		Rru_A3463	0.48	-0.4
3,988,868	-		Rru_A3463	0.49	-0.0
3,988,871	+		Rru_A3463	0.50	-0.0
3,988,872	-		Rru_A3463	0.50	+0.2
3,988,872	-		Rru_A3463	0.50	-0.0
3,988,874	+		Rru_A3463	0.51	+1.1
3,988,887	+		Rru_A3463	0.55	-0.0
3,988,887	+		Rru_A3463	0.55	+0.8
3,988,887	+		Rru_A3463	0.55	+0.4
3,988,888	-		Rru_A3463	0.56	+0.4
3,988,908	+		Rru_A3463	0.62	-0.0
3,989,022	-				-0.0
3,989,038	-				-0.0
3,989,091	+				+0.3
3,989,092	-				-0.2
3,989,118	+				+0.1
3,989,129	+				-0.4
3,989,130	-				+0.3
3,989,220	+				+0.6
3,989,245	+				-0.1
3,989,245	+				-0.0
3,989,317	-				-0.0