Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3455

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,978,593	+				+1.0
3,978,672	+				+0.9
3,978,673	-				+1.7
3,979,101	+		Rru_A3454	0.58	+1.4
3,979,101	+		Rru_A3454	0.58	-0.0
3,979,101	+		Rru_A3454	0.58	-0.0
3,979,101	+		Rru_A3454	0.58	+0.3
3,979,102	-		Rru_A3454	0.58	-1.0
3,979,102	-		Rru_A3454	0.58	-0.0
3,979,102	-		Rru_A3454	0.58	+0.8
3,979,102	-		Rru_A3454	0.58	-0.0
3,979,102	-		Rru_A3454	0.58	-0.1
3,979,102	-		Rru_A3454	0.58	-0.0
3,979,102	-		Rru_A3454	0.58	-0.0
3,979,102	-		Rru_A3454	0.58	-1.0
3,979,185	+		Rru_A3454	0.67	-0.0
3,979,185	+		Rru_A3454	0.67	-0.0
3,979,185	+		Rru_A3454	0.67	-0.0
3,979,186	-		Rru_A3454	0.67	-1.0
3,979,186	-		Rru_A3454	0.67	-0.4
3,979,242	+		Rru_A3454	0.73	-1.0
3,979,242	+		Rru_A3454	0.73	+0.5
3,979,242	+		Rru_A3454	0.73	-0.3
3,979,243	-		Rru_A3454	0.73	-0.5
3,979,243	-		Rru_A3454	0.73	+0.5
3,979,243	-		Rru_A3454	0.73	+0.9
3,979,243	-		Rru_A3454	0.73	-1.0
3,979,356	+		Rru_A3454	0.86	+0.7
3,979,356	+		Rru_A3454	0.86	-0.0
3,979,356	+		Rru_A3454	0.86	-0.3
3,979,356	+		Rru_A3454	0.86	-1.2
3,979,356	+		Rru_A3454	0.86	-1.0
3,979,357	-		Rru_A3454	0.86	-0.0
3,979,357	-		Rru_A3454	0.86	+0.2
3,979,357	-		Rru_A3454	0.86	+0.9
3,979,357	-		Rru_A3454	0.86	-0.0
3,979,357	-		Rru_A3454	0.86	+0.1
3,979,357	-		Rru_A3454	0.86	-0.0
3,979,359	+		Rru_A3454	0.86	-0.0
3,979,360	-		Rru_A3454	0.86	-0.2
3,979,360	-		Rru_A3454	0.86	-0.0
3,979,477	+				-0.0
3,979,477	+				+0.4
3,979,477	+				+0.2
3,979,477	+				-0.2
3,979,477	+				-0.0
3,979,478	-				+0.5
3,979,478	-				-1.7
3,979,478	-				-0.0
3,979,880	+		Rru_A3455	0.41	-0.0
3,979,881	-		Rru_A3455	0.42	-0.0
3,980,144	+		Rru_A3455	0.69	+0.0
3,980,144	+		Rru_A3455	0.69	+0.3
3,980,144	+		Rru_A3455	0.69	-0.3
3,980,145	-		Rru_A3455	0.69	-0.0
3,980,145	-		Rru_A3455	0.69	-0.0
3,980,145	-		Rru_A3455	0.69	-0.0
3,980,381	+				-0.0
3,980,381	+				-0.0
3,980,381	+				-0.0
3,980,382	-				+0.4
3,980,382	-				-0.0
3,980,382	-				-0.7
3,980,382	-				-0.8
3,980,382	-				-0.3
3,980,486	+				+0.6
3,980,501	-				-0.0
3,980,501	-				-0.0
3,980,611	-				+0.9
3,980,611	-				+1.5
3,980,611	-				-0.0
3,980,611	-				+0.6
3,980,662	+		Rru_A3456	0.12	+0.3
3,980,662	+		Rru_A3456	0.12	+0.5
3,980,662	+		Rru_A3456	0.12	-0.2
3,980,662	+		Rru_A3456	0.12	+0.3
3,980,686	+		Rru_A3456	0.15	-0.0
3,980,686	+		Rru_A3456	0.15	+0.2
3,980,686	+		Rru_A3456	0.15	-1.0
3,980,686	+		Rru_A3456	0.15	+2.3
3,980,686	+		Rru_A3456	0.15	+0.4
3,980,686	+		Rru_A3456	0.15	+0.6
3,980,687	-		Rru_A3456	0.15	+0.2
3,980,687	-		Rru_A3456	0.15	-1.0
3,980,687	-		Rru_A3456	0.15	-1.6
3,980,688	+		Rru_A3456	0.15	+0.7
3,980,688	+		Rru_A3456	0.15	-0.4
3,980,689	-		Rru_A3456	0.15	-0.0
3,980,689	-		Rru_A3456	0.15	-0.0
3,980,689	-		Rru_A3456	0.15	-0.0
3,980,689	-		Rru_A3456	0.15	+0.4
3,980,938	+		Rru_A3456	0.40	+0.3
3,980,938	+		Rru_A3456	0.40	+0.5
3,981,088	+		Rru_A3456	0.55	-0.0
3,981,089	-		Rru_A3456	0.55	-0.0
3,981,089	-		Rru_A3456	0.55	-0.0
3,981,089	-		Rru_A3456	0.55	+0.5
3,981,097	+		Rru_A3456	0.55	+0.9
3,981,152	-		Rru_A3456	0.61	-0.0
3,981,152	-		Rru_A3456	0.61	+0.6
3,981,275	-		Rru_A3456	0.73	-0.0