Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3450

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,972,651	+		Rru_A3448	0.77	-0.0
3,972,651	+		Rru_A3448	0.77	-0.0
3,972,651	+		Rru_A3448	0.77	+1.6
3,972,651	+		Rru_A3448	0.77	-0.0
3,972,957	+				+0.2
3,972,958	-				+0.6
3,972,958	-				-0.0
3,972,958	-				-0.2
3,972,958	-				-0.0
3,972,960	+				+1.1
3,972,960	+				-0.0
3,973,479	+				+1.0
3,973,480	-				-0.0
3,973,480	-				-0.1
3,974,043	-		Rru_A3450	0.49	-1.0
3,974,043	-		Rru_A3450	0.49	+0.6
3,974,068	+		Rru_A3450	0.51	+1.0
3,974,069	-		Rru_A3450	0.51	+0.3
3,974,266	+		Rru_A3450	0.70	+1.9
3,974,267	-		Rru_A3450	0.70	-0.0
3,974,269	+		Rru_A3450	0.70	-0.0
3,974,270	-		Rru_A3450	0.70	+0.4
3,974,468	+		Rru_A3450	0.89	+1.9
3,974,730	+				-0.0
3,974,731	-				-1.0
3,974,809	+				-0.0
3,974,809	+				+0.2
3,974,810	-				+0.5
3,975,001	-		Rru_A3451	0.58	-0.3
3,975,230	+				+0.8
3,975,230	+				-0.0
3,975,231	-				+0.8
3,975,231	-				+0.7