Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3445

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,968,960	-				-0.0
3,968,960	-				-0.0
3,968,960	-				+0.9
3,968,960	-				+0.4
3,968,966	-				-0.0
3,968,966	-				+1.4
3,968,966	-				+0.7
3,968,972	-				-0.0
3,968,972	-				+0.6
3,968,972	-				-0.0
3,968,972	-				+0.3
3,968,972	-				-0.0
3,968,972	-				-0.0
3,968,972	-				-0.0
3,968,972	-				+0.7
3,968,972	-				+0.6
3,968,972	-				+0.2
3,968,979	+				-0.0
3,968,986	+				-0.4
3,968,986	+				+1.0
3,968,986	+				-0.0
3,969,170	+				-1.3
3,969,337	+		Rru_A3445	0.18	-0.0
3,969,337	+		Rru_A3445	0.18	-1.8
3,969,337	+		Rru_A3445	0.18	-1.8
3,969,338	-		Rru_A3445	0.18	-0.0
3,969,338	-		Rru_A3445	0.18	-1.9
3,969,338	-		Rru_A3445	0.18	-2.7
3,969,338	-		Rru_A3445	0.18	-1.7
3,969,382	+		Rru_A3445	0.20	-2.0
3,969,382	+		Rru_A3445	0.20	-0.0
3,969,382	+		Rru_A3445	0.20	-1.6
3,969,382	+		Rru_A3445	0.20	-0.0
3,969,382	+		Rru_A3445	0.20	-1.5
3,969,382	+		Rru_A3445	0.20	-0.0
3,969,382	+		Rru_A3445	0.20	-2.8
3,969,382	+		Rru_A3445	0.20	-1.0
3,969,382	+		Rru_A3445	0.20	-0.0
3,969,383	-		Rru_A3445	0.20	-1.8
3,969,383	-		Rru_A3445	0.20	-0.0
3,969,383	-		Rru_A3445	0.20	-0.0
3,969,599	+		Rru_A3445	0.32	-0.8
3,969,599	+		Rru_A3445	0.32	-2.7
3,969,599	+		Rru_A3445	0.32	-0.0
3,969,599	+		Rru_A3445	0.32	-0.0
3,969,599	+		Rru_A3445	0.32	-0.0
3,969,599	+		Rru_A3445	0.32	-0.0
3,969,600	-		Rru_A3445	0.32	-2.3
3,969,600	-		Rru_A3445	0.32	-0.0
3,969,600	-		Rru_A3445	0.32	-2.4
3,969,600	-		Rru_A3445	0.32	-0.0
3,969,600	-		Rru_A3445	0.32	-0.0
3,969,820	+		Rru_A3445	0.44	-2.0
3,969,820	+		Rru_A3445	0.44	-2.2
3,969,820	+		Rru_A3445	0.44	-1.0
3,969,820	+		Rru_A3445	0.44	-1.3
3,969,820	+		Rru_A3445	0.44	-0.0
3,969,821	-		Rru_A3445	0.44	-1.8
3,969,821	-		Rru_A3445	0.44	-1.6
3,969,821	-		Rru_A3445	0.44	-1.3
3,969,821	-		Rru_A3445	0.44	-0.0
3,969,821	-		Rru_A3445	0.44	-1.9
3,969,821	-		Rru_A3445	0.44	-1.9
3,969,821	-		Rru_A3445	0.44	-1.6
3,970,396	+		Rru_A3445	0.76	-0.0
3,970,396	+		Rru_A3445	0.76	-2.3
3,970,396	+		Rru_A3445	0.76	-1.0
3,970,396	+		Rru_A3445	0.76	-0.0
3,970,396	+		Rru_A3445	0.76	-0.0
3,970,396	+		Rru_A3445	0.76	-1.9
3,970,396	+		Rru_A3445	0.76	-1.0
3,970,396	+		Rru_A3445	0.76	-1.5
3,970,396	+		Rru_A3445	0.76	-2.5
3,970,396	+		Rru_A3445	0.76	-4.0
3,970,396	+		Rru_A3445	0.76	-2.7
3,970,396	+		Rru_A3445	0.76	-2.8
3,970,397	-		Rru_A3445	0.76	-2.3
3,970,397	-		Rru_A3445	0.76	-1.6
3,970,397	-		Rru_A3445	0.76	-0.0
3,970,397	-		Rru_A3445	0.76	-2.0
3,970,397	-		Rru_A3445	0.76	-0.0
3,970,397	-		Rru_A3445	0.76	-0.0
3,970,534	+		Rru_A3445	0.83	-0.0
3,970,535	-		Rru_A3445	0.83	-0.0
3,970,549	+		Rru_A3445	0.84	-1.0
3,970,549	+		Rru_A3445	0.84	-0.0
3,970,549	+		Rru_A3445	0.84	-0.7
3,970,550	-		Rru_A3445	0.84	-2.5
3,970,550	-		Rru_A3445	0.84	-4.8
3,970,550	-		Rru_A3445	0.84	-0.0
3,971,369	+				-1.3
3,971,369	+				-0.4
3,971,371	+				-0.0
3,971,371	+				-0.1
3,971,371	+				-0.0
3,971,371	+				+0.6
3,971,371	+				-0.0