Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3428

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,944,938	-		Rru_A3427	0.20	-3.0
3,944,938	-		Rru_A3427	0.20	-0.0
3,944,964	-		Rru_A3427	0.22	-2.4
3,944,964	-		Rru_A3427	0.22	-2.8
3,944,976	-		Rru_A3427	0.23	-2.5
3,945,114	+		Rru_A3427	0.35	-2.1
3,945,114	+		Rru_A3427	0.35	-0.0
3,945,114	+		Rru_A3427	0.35	-0.0
3,945,115	-		Rru_A3427	0.35	-0.0
3,945,115	-		Rru_A3427	0.35	-0.0
3,945,270	+		Rru_A3427	0.47	-2.8
3,945,270	+		Rru_A3427	0.47	-1.8
3,945,271	-		Rru_A3427	0.48	-2.9
3,945,271	-		Rru_A3427	0.48	-3.3
3,945,271	-		Rru_A3427	0.48	-4.1
3,945,271	-		Rru_A3427	0.48	-0.0
3,945,271	-		Rru_A3427	0.48	-4.6
3,945,271	-		Rru_A3427	0.48	-3.0
3,945,271	-		Rru_A3427	0.48	-3.5
3,945,271	-		Rru_A3427	0.48	-2.0
3,945,273	+		Rru_A3427	0.48	-0.0
3,945,273	+		Rru_A3427	0.48	+0.9
3,945,273	+		Rru_A3427	0.48	-0.9
3,945,273	+		Rru_A3427	0.48	-0.0
3,945,273	+		Rru_A3427	0.48	-1.5
3,945,273	+		Rru_A3427	0.48	-0.0
3,945,274	-		Rru_A3427	0.48	-2.0
3,945,274	-		Rru_A3427	0.48	-1.0
3,945,567	+		Rru_A3427	0.72	-1.2
3,945,567	+		Rru_A3427	0.72	-0.9
3,945,567	+		Rru_A3427	0.72	-1.0
3,945,567	+		Rru_A3427	0.72	+1.6
3,945,568	-		Rru_A3427	0.72	-1.6
3,945,568	-		Rru_A3427	0.72	-2.5
3,945,568	-		Rru_A3427	0.72	-2.7
3,945,568	-		Rru_A3427	0.72	-1.6
3,945,568	-		Rru_A3427	0.72	-2.7
3,945,568	-		Rru_A3427	0.72	-1.6
3,945,568	-		Rru_A3427	0.72	-2.9
3,945,568	-		Rru_A3427	0.72	-5.4
3,945,631	-		Rru_A3427	0.77	-2.8
3,945,684	+		Rru_A3427	0.81	-0.0
3,945,684	+		Rru_A3427	0.81	-0.3
3,945,684	+		Rru_A3427	0.81	+1.1
3,945,684	+		Rru_A3427	0.81	-0.9
3,945,684	+		Rru_A3427	0.81	-0.0
3,945,684	+		Rru_A3427	0.81	-0.0
3,945,685	-		Rru_A3427	0.81	-3.7
3,945,685	-		Rru_A3427	0.81	-1.2
3,945,685	-		Rru_A3427	0.81	-1.4
3,945,685	-		Rru_A3427	0.81	-1.3
3,945,685	-		Rru_A3427	0.81	-2.2
3,945,685	-		Rru_A3427	0.81	-1.8
3,945,685	-		Rru_A3427	0.81	-2.6
3,945,685	-		Rru_A3427	0.81	-1.3
3,945,995	+		Rru_A3428	0.10	-2.6
3,945,995	+		Rru_A3428	0.10	-0.0
3,945,996	-		Rru_A3428	0.10	-2.7
3,945,996	-		Rru_A3428	0.10	-3.1
3,945,996	-		Rru_A3428	0.10	-3.6
3,945,996	-		Rru_A3428	0.10	-3.6
3,945,996	-		Rru_A3428	0.10	-2.9
3,945,996	-		Rru_A3428	0.10	-1.3
3,946,070	-		Rru_A3428	0.19	-1.2
3,946,070	-		Rru_A3428	0.19	-2.3
3,946,238	+		Rru_A3428	0.40	-3.2
3,946,238	+		Rru_A3428	0.40	-3.8
3,946,238	+		Rru_A3428	0.40	-1.6
3,946,239	-		Rru_A3428	0.40	-2.9
3,946,239	-		Rru_A3428	0.40	-3.4
3,946,239	-		Rru_A3428	0.40	-1.0
3,946,239	-		Rru_A3428	0.40	-2.1
3,946,239	-		Rru_A3428	0.40	-1.0
3,946,254	-		Rru_A3428	0.42	-0.0
3,946,254	-		Rru_A3428	0.42	-2.1
3,946,254	-		Rru_A3428	0.42	-1.6
3,946,350	+		Rru_A3428	0.54	-2.0
3,946,350	+		Rru_A3428	0.54	-0.0
3,946,350	+		Rru_A3428	0.54	-2.8
3,946,351	-		Rru_A3428	0.54	-3.3
3,946,454	+		Rru_A3428	0.67	-0.0
3,946,454	+		Rru_A3428	0.67	-3.5
3,946,455	-		Rru_A3428	0.67	-1.4
3,946,455	-		Rru_A3428	0.67	-3.4
3,946,457	+		Rru_A3428	0.67	-3.3
3,946,457	+		Rru_A3428	0.67	-0.1
3,946,458	-		Rru_A3428	0.67	-0.0
3,946,572	+		Rru_A3428	0.81	-2.8
3,946,724	+				-0.0
3,946,724	+				+1.3
3,946,725	-				-0.2
3,946,797	-				+1.2
3,946,797	-				-0.0
3,946,837	-				+1.4
3,946,847	+				-0.0
3,946,900	+				-0.0
3,946,901	-				+0.1
3,946,901	-				+2.0
3,946,901	-				-0.0
3,946,901	-				+1.1
3,946,905	+				+0.8
3,946,906	-				-1.6
3,946,906	-				-0.0
3,946,970	+		Rru_A3429	0.12	-0.0
3,946,970	+		Rru_A3429	0.12	+0.5
3,946,970	+		Rru_A3429	0.12	+0.6
3,946,970	+		Rru_A3429	0.12	+0.0
3,946,970	+		Rru_A3429	0.12	+0.0
3,946,971	-		Rru_A3429	0.13	-0.0
3,946,971	-		Rru_A3429	0.13	+1.6
3,946,971	-		Rru_A3429	0.13	+2.0
3,946,971	-		Rru_A3429	0.13	-0.0
3,946,971	-		Rru_A3429	0.13	-0.0
3,946,971	-		Rru_A3429	0.13	-1.0
3,946,971	-		Rru_A3429	0.13	-0.0
3,946,971	-		Rru_A3429	0.13	-0.0
3,946,971	-		Rru_A3429	0.13	+1.2
3,946,972	+		Rru_A3429	0.13	-0.0
3,946,973	-		Rru_A3429	0.13	+0.2
3,946,973	-		Rru_A3429	0.13	+0.7
3,947,241	+		Rru_A3429	0.60	+0.2
3,947,241	+		Rru_A3429	0.60	+0.6
3,947,241	+		Rru_A3429	0.60	+1.3
3,947,242	-		Rru_A3429	0.60	+0.3
3,947,242	-		Rru_A3429	0.60	+0.4
3,947,242	-		Rru_A3429	0.60	-0.4
3,947,248	+		Rru_A3429	0.61	+0.5
3,947,249	-		Rru_A3429	0.61	+0.3
3,947,382	+		Rru_A3429	0.84	+0.3
3,947,382	+		Rru_A3429	0.84	-0.0
3,947,382	+		Rru_A3429	0.84	+1.2
3,947,382	+		Rru_A3429	0.84	+0.4
3,947,382	+		Rru_A3429	0.84	-0.0
3,947,383	-		Rru_A3429	0.84	-0.0
3,947,383	-		Rru_A3429	0.84	-0.5
3,947,383	-		Rru_A3429	0.84	-0.0
3,947,383	-		Rru_A3429	0.84	-0.1
3,947,383	-		Rru_A3429	0.84	-0.1
3,947,383	-		Rru_A3429	0.84	-0.0
3,947,383	-		Rru_A3429	0.84	+0.1
3,947,383	-		Rru_A3429	0.84	+0.2
3,947,454	+				-1.0
3,947,454	+				+0.7
3,947,454	+				+1.2
3,947,454	+				-0.0
3,947,455	-				+1.1
3,947,455	-				-0.3
3,947,455	-				+0.1
3,947,579	+				+0.3
3,947,579	+				-0.0
3,947,579	+				+0.9
3,947,579	+				-0.0
3,947,580	-				+1.4
3,947,580	-				-0.0
3,947,684	+				-0.0
3,947,684	+				+0.5
3,947,710	+				+0.6