Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3426

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,942,867	+		Rru_A3425	0.47	-2.0
3,942,868	-		Rru_A3425	0.47	-3.7
3,942,952	-		Rru_A3425	0.60	-4.0
3,942,952	-		Rru_A3425	0.60	-3.1
3,942,952	-		Rru_A3425	0.60	-3.4
3,942,952	-		Rru_A3425	0.60	-0.0
3,943,266	-				-0.5
3,943,469	+		Rru_A3426	0.19	-0.4
3,943,469	+		Rru_A3426	0.19	-0.7
3,943,469	+		Rru_A3426	0.19	-0.3
3,943,470	-		Rru_A3426	0.19	-0.0
3,943,485	+		Rru_A3426	0.20	-0.0
3,943,485	+		Rru_A3426	0.20	-0.5
3,943,485	+		Rru_A3426	0.20	-0.2
3,943,485	+		Rru_A3426	0.20	-0.4
3,943,486	-		Rru_A3426	0.20	-0.7
3,943,486	-		Rru_A3426	0.20	-1.0
3,943,486	-		Rru_A3426	0.20	-1.2
3,943,486	-		Rru_A3426	0.20	-0.8
3,943,486	-		Rru_A3426	0.20	-1.0
3,943,487	+		Rru_A3426	0.21	-1.9
3,943,488	-		Rru_A3426	0.21	-1.2
3,943,488	-		Rru_A3426	0.21	-0.0
3,943,544	+		Rru_A3426	0.25	-0.8
3,943,544	+		Rru_A3426	0.25	-0.4
3,943,544	+		Rru_A3426	0.25	-0.0
3,943,544	+		Rru_A3426	0.25	-0.0
3,943,544	+		Rru_A3426	0.25	-0.7
3,943,544	+		Rru_A3426	0.25	-2.5
3,943,544	+		Rru_A3426	0.25	-0.3
3,943,544	+		Rru_A3426	0.25	-0.0
3,943,545	-		Rru_A3426	0.25	-2.3
3,943,545	-		Rru_A3426	0.25	-3.3
3,943,632	+		Rru_A3426	0.32	-0.8
3,943,831	-		Rru_A3426	0.47	-0.0
3,943,831	-		Rru_A3426	0.47	+2.9
3,943,831	-		Rru_A3426	0.47	-0.2
3,943,915	+		Rru_A3426	0.54	+0.1
3,943,916	-		Rru_A3426	0.54	-0.8
3,943,916	-		Rru_A3426	0.54	-0.0
3,944,022	+		Rru_A3426	0.62	-0.5
3,944,046	+		Rru_A3426	0.64	-0.5
3,944,047	-		Rru_A3426	0.64	-1.0
3,944,047	-		Rru_A3426	0.64	-1.0
3,944,109	-		Rru_A3426	0.69	-0.9
3,944,349	+		Rru_A3426	0.87	-0.0
3,944,349	+		Rru_A3426	0.87	-0.0
3,944,349	+		Rru_A3426	0.87	-0.0
3,944,350	-		Rru_A3426	0.87	-1.0
3,944,350	-		Rru_A3426	0.87	-1.0
3,944,352	+		Rru_A3426	0.87	-0.8
3,944,352	+		Rru_A3426	0.87	-0.9
3,944,353	-		Rru_A3426	0.88	-0.0
3,944,353	-		Rru_A3426	0.88	-0.0
3,944,353	-		Rru_A3426	0.88	-0.0
3,944,373	+		Rru_A3426	0.89	-0.4
3,944,373	+		Rru_A3426	0.89	-2.1
3,944,373	+		Rru_A3426	0.89	-0.6
3,944,373	+		Rru_A3426	0.89	-0.7
3,944,374	-		Rru_A3426	0.89	-1.7
3,944,374	-		Rru_A3426	0.89	-1.0
3,944,374	-		Rru_A3426	0.89	-0.7
3,944,374	-		Rru_A3426	0.89	-2.8
3,944,375	+		Rru_A3426	0.89	+0.2
3,944,375	+		Rru_A3426	0.89	-1.0
3,944,375	+		Rru_A3426	0.89	-0.0
3,944,376	-		Rru_A3426	0.89	-0.0
3,944,376	-		Rru_A3426	0.89	-1.1
3,944,376	-		Rru_A3426	0.89	-1.6
3,944,376	-		Rru_A3426	0.89	-1.4
3,944,512	-				-0.5
3,944,512	-				+1.1
3,944,534	+				+0.4
3,944,534	+				+1.1
3,944,535	-				-0.0
3,944,575	+				-0.0
3,944,576	-				+0.6
3,944,576	-				+0.5
3,944,616	+				-0.0
3,944,656	+				-0.5
3,944,656	+				-0.0
3,944,658	+				+1.7
3,944,709	+				-0.2
3,944,760	+				-0.0
3,944,760	+				-3.1
3,944,760	+				-1.0
3,944,760	+				+0.6
3,944,761	-				-4.2
3,944,761	-				-2.3
3,944,761	-				-1.6
3,944,761	-				-1.7
3,944,857	-		Rru_A3427	0.14	-2.6
3,944,868	+		Rru_A3427	0.15	-0.0
3,944,869	-		Rru_A3427	0.15	-5.3
3,944,869	-		Rru_A3427	0.15	-3.0
3,944,869	-		Rru_A3427	0.15	-3.0
3,944,869	-		Rru_A3427	0.15	-2.6
3,944,869	-		Rru_A3427	0.15	-3.5
3,944,869	-		Rru_A3427	0.15	-0.0
3,944,869	-		Rru_A3427	0.15	-2.7
3,944,869	-		Rru_A3427	0.15	-1.6
3,944,869	-		Rru_A3427	0.15	-3.3
3,944,869	-		Rru_A3427	0.15	-2.9
3,944,869	-		Rru_A3427	0.15	-2.8
3,944,869	-		Rru_A3427	0.15	-3.9
3,944,869	-		Rru_A3427	0.15	-3.9
3,944,893	-		Rru_A3427	0.17	-2.9
3,944,893	-		Rru_A3427	0.17	-2.8
3,944,893	-		Rru_A3427	0.17	-2.0
3,944,938	-		Rru_A3427	0.20	-3.0
3,944,938	-		Rru_A3427	0.20	-0.0
3,944,964	-		Rru_A3427	0.22	-2.4
3,944,964	-		Rru_A3427	0.22	-2.8
3,944,976	-		Rru_A3427	0.23	-2.5
3,945,114	+		Rru_A3427	0.35	-2.1
3,945,114	+		Rru_A3427	0.35	-0.0
3,945,114	+		Rru_A3427	0.35	-0.0
3,945,115	-		Rru_A3427	0.35	-0.0
3,945,115	-		Rru_A3427	0.35	-0.0
3,945,270	+		Rru_A3427	0.47	-2.8
3,945,270	+		Rru_A3427	0.47	-1.8
3,945,271	-		Rru_A3427	0.48	-2.9
3,945,271	-		Rru_A3427	0.48	-3.3
3,945,271	-		Rru_A3427	0.48	-4.1
3,945,271	-		Rru_A3427	0.48	-0.0
3,945,271	-		Rru_A3427	0.48	-4.6
3,945,271	-		Rru_A3427	0.48	-3.0
3,945,271	-		Rru_A3427	0.48	-3.5
3,945,271	-		Rru_A3427	0.48	-2.0
3,945,273	+		Rru_A3427	0.48	-0.0
3,945,273	+		Rru_A3427	0.48	+0.9
3,945,273	+		Rru_A3427	0.48	-0.9
3,945,273	+		Rru_A3427	0.48	-0.0
3,945,273	+		Rru_A3427	0.48	-1.5
3,945,273	+		Rru_A3427	0.48	-0.0
3,945,274	-		Rru_A3427	0.48	-2.0
3,945,274	-		Rru_A3427	0.48	-1.0