Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3391

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,907,651	+		Rru_A3390	0.46	+1.1
3,907,651	+		Rru_A3390	0.46	+0.7
3,907,651	+		Rru_A3390	0.46	-0.8
3,907,651	+		Rru_A3390	0.46	-0.0
3,907,651	+		Rru_A3390	0.46	+0.6
3,907,652	-		Rru_A3390	0.46	-0.0
3,907,747	+		Rru_A3390	0.52	-0.0
3,907,748	-		Rru_A3390	0.52	-1.0
3,907,805	-		Rru_A3390	0.56	-0.0
3,907,834	+		Rru_A3390	0.59	-0.2
3,907,835	-		Rru_A3390	0.59	-0.0
3,907,915	+		Rru_A3390	0.64	-0.0
3,907,915	+		Rru_A3390	0.64	-0.3
3,907,915	+		Rru_A3390	0.64	-0.0
3,907,915	+		Rru_A3390	0.64	+1.0
3,907,916	-		Rru_A3390	0.64	-0.0
3,907,916	-		Rru_A3390	0.64	-1.0
3,907,916	-		Rru_A3390	0.64	-0.0
3,907,916	-		Rru_A3390	0.64	+0.3
3,907,916	-		Rru_A3390	0.64	+0.3
3,908,008	+		Rru_A3390	0.71	+0.1
3,908,008	+		Rru_A3390	0.71	-1.0
3,908,008	+		Rru_A3390	0.71	-0.1
3,908,008	+		Rru_A3390	0.71	+0.3
3,908,008	+		Rru_A3390	0.71	-0.2
3,908,009	-		Rru_A3390	0.71	-0.0
3,908,009	-		Rru_A3390	0.71	-0.0
3,908,009	-		Rru_A3390	0.71	+0.4
3,908,009	-		Rru_A3390	0.71	+0.5
3,908,116	+		Rru_A3390	0.78	+2.0
3,908,117	-		Rru_A3390	0.79	+0.5
3,908,126	-		Rru_A3390	0.79	+0.6
3,908,126	-		Rru_A3390	0.79	-0.0
3,908,126	-		Rru_A3390	0.79	-0.5
3,908,255	-		Rru_A3390	0.88	-0.0
3,908,352	-				+0.3
3,908,352	-				+0.3
3,908,352	-				-0.0
3,908,353	+				-0.0
3,908,353	+				+0.1
3,908,354	-				+0.3
3,908,600	+				+0.6
3,908,678	+				+0.1
3,908,678	+				+0.2
3,908,678	+				+0.5
3,908,679	-				-0.4
3,908,679	-				+1.3
3,909,167	+		Rru_A3391	0.49	-0.7
3,909,167	+		Rru_A3391	0.49	+0.9
3,909,168	-		Rru_A3391	0.49	+0.1
3,909,173	+		Rru_A3391	0.50	+1.5
3,909,173	+		Rru_A3391	0.50	+1.1
3,909,173	+		Rru_A3391	0.50	+1.2
3,909,173	+		Rru_A3391	0.50	-0.0
3,909,173	+		Rru_A3391	0.50	+1.4
3,909,173	+		Rru_A3391	0.50	-0.5
3,909,173	+		Rru_A3391	0.50	-0.0
3,909,174	-		Rru_A3391	0.50	-0.0
3,909,174	-		Rru_A3391	0.50	-0.2
3,909,174	-		Rru_A3391	0.50	-0.4
3,909,174	-		Rru_A3391	0.50	-0.0
3,909,174	-		Rru_A3391	0.50	-0.0
3,909,432	+		Rru_A3391	0.74	+3.4
3,909,432	+		Rru_A3391	0.74	+1.4
3,909,432	+		Rru_A3391	0.74	+1.2
3,909,432	+		Rru_A3391	0.74	+1.3
3,909,433	-		Rru_A3391	0.74	-0.0
3,909,433	-		Rru_A3391	0.74	-0.0
3,909,539	+		Rru_A3391	0.84	+1.3
3,909,540	-		Rru_A3391	0.84	+1.3
3,909,737	+				-0.0
3,909,738	-				+1.1
3,909,764	+				-0.0
3,909,765	-				+1.0
3,909,862	-		Rru_A3392	0.18	+0.7
3,909,862	-		Rru_A3392	0.18	+0.7
3,909,882	+		Rru_A3392	0.24	+2.1
3,909,882	+		Rru_A3392	0.24	+2.1
3,909,882	+		Rru_A3392	0.24	-0.0
3,909,883	-		Rru_A3392	0.24	-0.1
3,909,883	-		Rru_A3392	0.24	-0.0
3,909,980	+		Rru_A3392	0.50	-1.0
3,910,051	+		Rru_A3392	0.69	-0.0
3,910,052	-		Rru_A3392	0.69	-1.6
3,910,084	+		Rru_A3392	0.78	+1.7
3,910,124	-		Rru_A3392	0.89	-1.6
3,910,124	-		Rru_A3392	0.89	-0.0
3,910,304	-				-0.0
3,910,486	+		Rru_A3393	0.14	-0.0
3,910,487	-		Rru_A3393	0.14	+2.0
3,910,487	-		Rru_A3393	0.14	-0.0
3,910,487	-		Rru_A3393	0.14	-0.0