Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3388

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,905,372	+		Rru_A3388	0.39	-1.0
3,905,372	+		Rru_A3388	0.39	+0.9
3,905,372	+		Rru_A3388	0.39	+1.4
3,905,372	+		Rru_A3388	0.39	+0.0
3,905,372	+		Rru_A3388	0.39	-0.0
3,905,373	-		Rru_A3388	0.39	+1.2
3,905,965	-				+0.1
3,906,360	+		Rru_A3389	0.38	-1.0
3,906,361	-		Rru_A3389	0.38	-1.6
3,906,406	-		Rru_A3389	0.43	+0.7
3,906,406	-		Rru_A3389	0.43	-0.0
3,906,406	-		Rru_A3389	0.43	+0.5
3,906,409	-		Rru_A3389	0.43	-0.0
3,906,456	+		Rru_A3389	0.47	-0.8
3,906,457	-		Rru_A3389	0.48	+0.1
3,906,457	-		Rru_A3389	0.48	-0.0
3,906,457	-		Rru_A3389	0.48	+0.5
3,906,457	-		Rru_A3389	0.48	-0.0
3,906,457	-		Rru_A3389	0.48	+0.1
3,906,457	-		Rru_A3389	0.48	+0.3
3,906,500	-		Rru_A3389	0.52	-0.0
3,906,633	+		Rru_A3389	0.65	+0.4
3,906,634	-		Rru_A3389	0.65	-0.0
3,906,634	-		Rru_A3389	0.65	+0.3
3,906,634	-		Rru_A3389	0.65	+0.8
3,906,647	+		Rru_A3389	0.66	+1.1
3,906,647	+		Rru_A3389	0.66	-0.0
3,906,647	+		Rru_A3389	0.66	-0.0
3,906,648	-		Rru_A3389	0.66	-0.0
3,906,648	-		Rru_A3389	0.66	-0.0
3,906,648	-		Rru_A3389	0.66	-0.0
3,906,648	-		Rru_A3389	0.66	-0.0
3,906,778	+		Rru_A3389	0.79	-0.0
3,906,778	+		Rru_A3389	0.79	+0.2
3,906,778	+		Rru_A3389	0.79	+0.4
3,906,779	-		Rru_A3389	0.79	-1.0
3,906,779	-		Rru_A3389	0.79	-0.6
3,906,779	-		Rru_A3389	0.79	-0.2
3,906,779	-		Rru_A3389	0.79	+1.2
3,906,780	+		Rru_A3389	0.79	+1.6
3,906,780	+		Rru_A3389	0.79	-0.0
3,906,780	+		Rru_A3389	0.79	+0.5
3,906,781	-		Rru_A3389	0.79	-0.0
3,906,781	-		Rru_A3389	0.79	-0.0
3,906,781	-		Rru_A3389	0.79	-0.0
3,906,781	-		Rru_A3389	0.79	-0.2
3,906,781	-		Rru_A3389	0.79	+1.1
3,906,913	-				-0.0