Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3385

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,901,580	+		Rru_A3384	0.22	-0.0
3,901,669	+		Rru_A3384	0.34	-2.6
3,901,669	+		Rru_A3384	0.34	-2.6
3,901,669	+		Rru_A3384	0.34	-1.0
3,901,720	+		Rru_A3384	0.41	-0.0
3,901,747	+		Rru_A3384	0.44	-0.0
3,901,821	+		Rru_A3384	0.54	-0.0
3,901,821	+		Rru_A3384	0.54	-2.3
3,901,822	-		Rru_A3384	0.54	-2.8
3,901,822	-		Rru_A3384	0.54	-0.0
3,901,822	-		Rru_A3384	0.54	-1.6
3,901,905	-		Rru_A3384	0.65	-2.0
3,901,905	-		Rru_A3384	0.65	-2.0
3,901,905	-		Rru_A3384	0.65	-0.0
3,901,951	+		Rru_A3384	0.71	-0.0
3,901,981	+		Rru_A3384	0.75	-1.6
3,902,128	+				-3.3
3,902,129	-				-0.0
3,902,129	-				-2.0
3,902,129	-				-3.8
3,902,228	-				-1.0
3,902,429	-		Rru_A3385	0.19	-0.0
3,902,429	-		Rru_A3385	0.19	-0.0
3,902,476	+		Rru_A3385	0.25	-0.5
3,902,477	-		Rru_A3385	0.25	-0.0
3,903,017	+				+0.5
3,903,017	+				-0.1
3,903,017	+				-0.0
3,903,017	+				-0.0
3,903,017	+				+0.1
3,903,018	-				+0.8
3,903,018	-				+0.7
3,903,468	+		Rru_A3386	0.35	-0.0
3,903,659	+		Rru_A3386	0.70	+1.0
3,903,659	+		Rru_A3386	0.70	-0.0
3,903,660	-		Rru_A3386	0.70	-0.0
3,903,678	-		Rru_A3386	0.73	-0.0