Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3380

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,895,455	+		Rru_A3379	0.18	+1.1
3,895,456	-		Rru_A3379	0.18	+0.4
3,895,456	-		Rru_A3379	0.18	+2.2
3,895,456	-		Rru_A3379	0.18	+2.4
3,895,456	-		Rru_A3379	0.18	+2.0
3,895,587	+		Rru_A3379	0.34	+0.0
3,895,587	+		Rru_A3379	0.34	-1.6
3,895,587	+		Rru_A3379	0.34	+0.2
3,895,587	+		Rru_A3379	0.34	-0.0
3,895,588	-		Rru_A3379	0.34	-1.0
3,895,588	-		Rru_A3379	0.34	-0.0
3,895,588	-		Rru_A3379	0.34	-0.0
3,895,588	-		Rru_A3379	0.34	+0.3
3,895,588	-		Rru_A3379	0.34	+1.1
3,895,588	-		Rru_A3379	0.34	+1.2
3,895,713	+		Rru_A3379	0.48	+0.5
3,895,713	+		Rru_A3379	0.48	+0.5
3,895,714	-		Rru_A3379	0.49	-0.0
3,895,800	+		Rru_A3379	0.59	+2.3
3,895,801	-		Rru_A3379	0.59	+0.3
3,895,801	-		Rru_A3379	0.59	-0.0
3,895,803	-		Rru_A3379	0.59	-0.0
3,896,077	+				+1.2
3,896,077	+				-0.0
3,896,207	-				+0.3
3,896,212	+				-0.0
3,896,212	+				-0.0
3,896,213	-				+0.8
3,896,213	-				+1.8
3,896,213	-				+1.0
3,896,213	-				-0.0
3,896,213	-				-0.0
3,896,213	-				+0.0
3,896,213	-				+0.5
3,896,213	-				+0.4
3,896,213	-				-0.0
3,896,213	-				+2.7
3,896,213	-				-1.2
3,896,213	-				+0.2
3,896,213	-				+0.7
3,896,344	+				-0.0
3,896,344	+				-0.0
3,896,344	+				-0.0
3,896,344	+				+1.1
3,896,344	+				+0.7
3,896,345	-				+1.3
3,896,539	+		Rru_A3380	0.18	-0.0
3,896,564	-		Rru_A3380	0.21	-3.7
3,896,591	-		Rru_A3380	0.23	-0.0
3,897,160	+		Rru_A3380	0.81	-0.0
3,897,590	+		Rru_A3381	0.17	+0.4
3,897,590	+		Rru_A3381	0.17	-0.0
3,897,590	+		Rru_A3381	0.17	-0.1
3,897,818	+		Rru_A3381	0.32	-0.0
3,897,818	+		Rru_A3381	0.32	+0.1
3,898,017	-		Rru_A3381	0.45	-0.4