Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3378

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,893,307	-				+0.7
3,893,326	-				-0.0
3,893,326	-				-0.0
3,893,326	-				-1.0
3,893,389	-				-0.0
3,893,389	-				-1.0
3,893,389	-				+0.7
3,893,401	-				+0.8
3,893,421	-				+0.8
3,893,479	+		Rru_A3377	0.16	+1.6
3,893,480	-		Rru_A3377	0.16	+1.5
3,894,134	+				-0.0
3,894,134	+				+1.0
3,894,135	-				-0.0
3,894,164	+				-0.1
3,894,246	+				-0.0
3,894,246	+				+0.1
3,894,248	+				+0.2
3,894,248	+				-0.0
3,894,248	+				-1.0
3,894,249	-				+1.4
3,894,523	-		Rru_A3378	0.32	+0.6
3,894,524	+		Rru_A3378	0.32	+0.0
3,894,524	+		Rru_A3378	0.32	-0.9
3,894,525	-		Rru_A3378	0.32	-2.0
3,894,674	+		Rru_A3378	0.48	-0.1
3,894,674	+		Rru_A3378	0.48	-0.3
3,894,674	+		Rru_A3378	0.48	-0.3
3,894,674	+		Rru_A3378	0.48	-0.0
3,894,675	-		Rru_A3378	0.48	-0.4
3,894,675	-		Rru_A3378	0.48	+0.1
3,894,675	-		Rru_A3378	0.48	-0.0
3,894,675	-		Rru_A3378	0.48	+0.9
3,894,849	-		Rru_A3378	0.67	-1.0
3,895,147	-				-0.0
3,895,215	+				+0.8
3,895,252	+				-0.0
3,895,455	+		Rru_A3379	0.18	+1.1
3,895,456	-		Rru_A3379	0.18	+0.4
3,895,456	-		Rru_A3379	0.18	+2.2
3,895,456	-		Rru_A3379	0.18	+2.4
3,895,456	-		Rru_A3379	0.18	+2.0
3,895,587	+		Rru_A3379	0.34	+0.0
3,895,587	+		Rru_A3379	0.34	-1.6
3,895,587	+		Rru_A3379	0.34	+0.2
3,895,587	+		Rru_A3379	0.34	-0.0
3,895,588	-		Rru_A3379	0.34	-1.0
3,895,588	-		Rru_A3379	0.34	-0.0
3,895,588	-		Rru_A3379	0.34	-0.0
3,895,588	-		Rru_A3379	0.34	+0.3
3,895,588	-		Rru_A3379	0.34	+1.1
3,895,588	-		Rru_A3379	0.34	+1.2
3,895,713	+		Rru_A3379	0.48	+0.5
3,895,713	+		Rru_A3379	0.48	+0.5
3,895,714	-		Rru_A3379	0.49	-0.0
3,895,800	+		Rru_A3379	0.59	+2.3
3,895,801	-		Rru_A3379	0.59	+0.3
3,895,801	-		Rru_A3379	0.59	-0.0
3,895,803	-		Rru_A3379	0.59	-0.0
3,896,077	+				+1.2
3,896,077	+				-0.0