Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3371

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,886,143	+				+0.2
3,886,144	-				+1.3
3,886,144	-				+0.3
3,886,160	+				+0.6
3,886,160	+				-0.0
3,886,160	+				+0.7
3,886,161	-				-0.0
3,886,161	-				+3.2
3,886,356	+		Rru_A3370	0.18	-1.0
3,886,356	+		Rru_A3370	0.18	-0.0
3,886,356	+		Rru_A3370	0.18	-0.0
3,886,357	-		Rru_A3370	0.18	-0.0
3,886,357	-		Rru_A3370	0.18	-0.4
3,886,357	-		Rru_A3370	0.18	-0.0
3,886,368	+		Rru_A3370	0.19	-1.6
3,886,369	-		Rru_A3370	0.19	-0.0
3,886,369	-		Rru_A3370	0.19	+0.6
3,886,369	-		Rru_A3370	0.19	+0.3
3,886,762	-		Rru_A3370	0.65	-0.0
3,886,762	-		Rru_A3370	0.65	-0.0
3,886,779	+		Rru_A3370	0.67	+0.6
3,886,779	+		Rru_A3370	0.67	-0.0
3,886,818	+		Rru_A3370	0.72	+1.2
3,886,818	+		Rru_A3370	0.72	-0.0
3,886,819	-		Rru_A3370	0.72	+1.3
3,886,819	-		Rru_A3370	0.72	+0.4
3,886,860	+		Rru_A3370	0.77	-0.0
3,886,861	-		Rru_A3370	0.77	-0.0
3,886,861	-		Rru_A3370	0.77	-0.0
3,886,861	-		Rru_A3370	0.77	+0.1
3,887,021	+				-0.0
3,887,407	+		Rru_A3371	0.35	+1.4
3,887,408	-		Rru_A3371	0.35	+1.4
3,887,408	-		Rru_A3371	0.35	-0.4
3,887,408	-		Rru_A3371	0.35	+0.7
3,887,408	-		Rru_A3371	0.35	+1.1
3,887,408	-		Rru_A3371	0.35	+1.7
3,887,674	+		Rru_A3371	0.62	-0.0
3,887,764	+		Rru_A3371	0.71	+1.4
3,887,893	+		Rru_A3371	0.84	-0.0
3,887,894	-		Rru_A3371	0.85	+1.3
3,888,059	-				-0.2
3,888,062	+				+1.3
3,888,063	-				-1.0
3,888,063	-				-0.0
3,888,063	-				+1.0
3,888,063	-				+1.0
3,888,063	-				-0.0
3,888,063	-				-0.0
3,888,191	+				+0.3
3,888,227	+				-1.2
3,888,227	+				-0.0
3,888,227	+				+0.4
3,888,228	-				+0.5
3,888,229	+				-0.0
3,888,230	-				+1.2
3,888,299	+		Rru_A3372	0.21	+0.9
3,888,300	-		Rru_A3372	0.21	-0.0
3,888,359	+		Rru_A3372	0.31	-0.0
3,888,360	-		Rru_A3372	0.31	-1.0
3,888,476	+		Rru_A3372	0.50	-0.0
3,888,476	+		Rru_A3372	0.50	+0.6
3,888,477	-		Rru_A3372	0.50	+0.2
3,888,477	-		Rru_A3372	0.50	+0.6
3,888,477	-		Rru_A3372	0.50	-1.0
3,888,541	+		Rru_A3372	0.61	-0.0
3,888,541	+		Rru_A3372	0.61	+0.4
3,888,542	-		Rru_A3372	0.61	+0.3
3,888,542	-		Rru_A3372	0.61	-0.0
3,888,596	+		Rru_A3372	0.70	-1.0
3,888,596	+		Rru_A3372	0.70	-0.5
3,888,597	-		Rru_A3372	0.70	+1.4
3,888,597	-		Rru_A3372	0.70	+2.0
3,888,597	-		Rru_A3372	0.70	+0.8
3,888,597	-		Rru_A3372	0.70	+0.3
3,888,780	-				-0.0
3,888,842	+				+0.9
3,888,842	+				-0.0
3,888,842	+				+1.3
3,888,892	+				+1.3
3,888,892	+				+0.8
3,888,892	+				+0.8
3,888,892	+				-0.0