Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3363

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,874,490	-				-0.0
3,874,688	+		Rru_A3362	0.23	+0.3
3,874,688	+		Rru_A3362	0.23	+0.3
3,874,805	-		Rru_A3362	0.36	-0.7
3,874,805	-		Rru_A3362	0.36	-1.1
3,874,937	-		Rru_A3362	0.51	-0.9
3,875,109	-		Rru_A3362	0.71	-0.0
3,875,121	-		Rru_A3362	0.72	-0.0
3,875,374	+				+0.5
3,875,374	+				-0.0
3,875,374	+				+0.4
3,875,375	-				-1.0
3,875,437	-				-0.0
3,875,694	+		Rru_A3363	0.18	-0.0
3,875,694	+		Rru_A3363	0.18	+0.7
3,875,981	+		Rru_A3363	0.36	+0.4
3,875,981	+		Rru_A3363	0.36	+0.3
3,875,982	-		Rru_A3363	0.36	-0.0
3,875,982	-		Rru_A3363	0.36	-0.0
3,875,982	-		Rru_A3363	0.36	+0.7
3,876,042	+		Rru_A3363	0.40	-0.0
3,876,042	+		Rru_A3363	0.40	-0.0
3,876,042	+		Rru_A3363	0.40	+0.2
3,876,042	+		Rru_A3363	0.40	+0.5
3,876,042	+		Rru_A3363	0.40	-1.1
3,876,042	+		Rru_A3363	0.40	-0.4
3,876,042	+		Rru_A3363	0.40	+0.3
3,876,042	+		Rru_A3363	0.40	-0.3
3,876,043	-		Rru_A3363	0.40	+0.1
3,876,043	-		Rru_A3363	0.40	+0.2
3,876,043	-		Rru_A3363	0.40	+1.7
3,876,043	-		Rru_A3363	0.40	-0.0
3,876,411	-		Rru_A3363	0.64	+1.4
3,876,411	-		Rru_A3363	0.64	+0.1
3,876,411	-		Rru_A3363	0.64	-0.6
3,876,618	+		Rru_A3363	0.77	-0.0
3,876,863	+				-0.0
3,876,863	+				-0.0
3,876,863	+				-0.0
3,876,863	+				-0.0
3,876,863	+				-0.4
3,876,864	-				+0.3
3,876,864	-				+0.2
3,876,926	+				-0.0
3,876,927	-				+0.8
3,876,971	+				-0.0
3,876,971	+				-0.0
3,876,972	-				-0.0
3,877,076	+				-0.5
3,877,076	+				-0.0
3,877,077	-				+0.3
3,877,077	-				-0.2
3,877,077	-				-0.0
3,877,422	+		Rru_A3364	0.37	+0.9
3,877,545	+		Rru_A3364	0.47	+0.4
3,877,546	-		Rru_A3364	0.47	-0.8
3,877,546	-		Rru_A3364	0.47	-0.0
3,877,546	-		Rru_A3364	0.47	-0.0
3,877,547	+		Rru_A3364	0.47	+0.6
3,877,547	+		Rru_A3364	0.47	-0.0
3,877,547	+		Rru_A3364	0.47	-0.0
3,877,547	+		Rru_A3364	0.47	+0.4
3,877,548	-		Rru_A3364	0.47	+0.0
3,877,548	-		Rru_A3364	0.47	-0.0
3,877,548	-		Rru_A3364	0.47	-0.0
3,877,548	-		Rru_A3364	0.47	-1.0
3,877,548	-		Rru_A3364	0.47	+0.9
3,877,548	-		Rru_A3364	0.47	-0.0
3,877,548	-		Rru_A3364	0.47	-0.0
3,877,667	+		Rru_A3364	0.57	+0.3
3,877,667	+		Rru_A3364	0.57	+0.1
3,877,667	+		Rru_A3364	0.57	-0.0
3,877,668	-		Rru_A3364	0.57	-1.0
3,877,668	-		Rru_A3364	0.57	-0.0
3,877,668	-		Rru_A3364	0.57	+0.3
3,877,668	-		Rru_A3364	0.57	-0.0
3,877,884	+		Rru_A3364	0.74	-0.2
3,877,884	+		Rru_A3364	0.74	-0.0
3,877,885	-		Rru_A3364	0.74	-0.3
3,877,890	+		Rru_A3364	0.75	+0.4
3,877,890	+		Rru_A3364	0.75	-0.0
3,877,890	+		Rru_A3364	0.75	-0.0
3,877,890	+		Rru_A3364	0.75	-0.0
3,877,891	-		Rru_A3364	0.75	-0.0
3,877,891	-		Rru_A3364	0.75	+0.4