Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3345

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,856,263	-		Rru_A3344	0.52	-1.4
3,856,356	+		Rru_A3344	0.77	-0.2
3,856,356	+		Rru_A3344	0.77	-1.0
3,856,357	-		Rru_A3344	0.77	-1.0
3,856,413	+				-0.0
3,856,415	+				-0.0
3,856,449	-				-0.0
3,856,532	-				-0.4
3,856,884	+				-0.0
3,857,075	+				-0.0
3,857,170	+				+0.2
3,857,170	+				-0.0
3,857,171	-				+0.4
3,857,225	+				-0.0
3,857,326	+				-0.0
3,857,327	-				-0.0
3,857,327	-				-0.0
3,858,014	-		Rru_A3345	0.36	+0.3
3,858,047	+		Rru_A3345	0.38	-0.0
3,858,048	-		Rru_A3345	0.38	-0.0
3,858,048	-		Rru_A3345	0.38	-0.4
3,858,368	+		Rru_A3345	0.53	+0.4
3,858,369	-		Rru_A3345	0.53	-0.0
3,858,632	+		Rru_A3345	0.65	+0.5
3,858,632	+		Rru_A3345	0.65	-0.0
3,858,633	-		Rru_A3345	0.65	+0.9
3,858,633	-		Rru_A3345	0.65	-0.5
3,858,633	-		Rru_A3345	0.65	-0.0
3,858,837	+		Rru_A3345	0.75	-0.0
3,858,838	-		Rru_A3345	0.75	-0.0
3,858,838	-		Rru_A3345	0.75	-1.0
3,858,838	-		Rru_A3345	0.75	-0.0
3,858,855	+		Rru_A3345	0.76	-1.1
3,858,856	-		Rru_A3345	0.76	-0.5
3,858,991	+		Rru_A3345	0.82	+0.4
3,858,991	+		Rru_A3345	0.82	-0.0
3,858,991	+		Rru_A3345	0.82	-1.0
3,858,991	+		Rru_A3345	0.82	-1.0
3,858,991	+		Rru_A3345	0.82	-0.0
3,858,991	+		Rru_A3345	0.82	-0.0
3,858,992	-		Rru_A3345	0.82	-0.0
3,858,992	-		Rru_A3345	0.82	-0.0
3,858,992	-		Rru_A3345	0.82	-0.6
3,859,183	+				+1.0
3,859,183	+				-0.0
3,859,183	+				+1.2
3,859,184	-				-0.0
3,859,184	-				-0.0
3,859,274	+				+1.2
3,859,492	+				-0.0
3,859,492	+				+1.4
3,859,493	-				+0.4
3,859,493	-				+0.7
3,859,507	+				-0.0
3,859,508	-				+0.4
3,859,508	-				-0.0
3,859,508	-				-0.0
3,859,595	-				-0.0
3,859,808	+				+0.4
3,859,809	-				-0.0
3,859,809	-				-0.0
3,859,859	+		Rru_A3346	0.11	+0.2
3,859,860	-		Rru_A3346	0.11	-0.0
3,859,860	-		Rru_A3346	0.11	-0.0
3,859,982	+		Rru_A3346	0.19	-0.0
3,859,982	+		Rru_A3346	0.19	-0.0
3,859,982	+		Rru_A3346	0.19	-0.0
3,859,983	-		Rru_A3346	0.19	-0.0
3,859,983	-		Rru_A3346	0.19	-1.0
3,859,983	-		Rru_A3346	0.19	-0.0
3,859,983	-		Rru_A3346	0.19	+0.2
3,859,983	-		Rru_A3346	0.19	-0.2
3,859,983	-		Rru_A3346	0.19	+0.7
3,860,157	-		Rru_A3346	0.32	+0.5
3,860,165	+		Rru_A3346	0.32	-0.0
3,860,166	-		Rru_A3346	0.32	-0.7
3,860,171	+		Rru_A3346	0.33	-0.0
3,860,171	+		Rru_A3346	0.33	-0.9
3,860,171	+		Rru_A3346	0.33	+0.5
3,860,171	+		Rru_A3346	0.33	-0.0
3,860,171	+		Rru_A3346	0.33	+0.6
3,860,171	+		Rru_A3346	0.33	+0.7
3,860,172	-		Rru_A3346	0.33	-0.0
3,860,172	-		Rru_A3346	0.33	+0.8
3,860,172	-		Rru_A3346	0.33	+0.2
3,860,172	-		Rru_A3346	0.33	-0.0
3,860,172	-		Rru_A3346	0.33	+0.2
3,860,172	-		Rru_A3346	0.33	-0.0
3,860,342	+		Rru_A3346	0.45	-0.0
3,860,342	+		Rru_A3346	0.45	-0.7
3,860,342	+		Rru_A3346	0.45	+0.3
3,860,342	+		Rru_A3346	0.45	-0.0
3,860,343	-		Rru_A3346	0.45	+1.2
3,860,343	-		Rru_A3346	0.45	-0.8
3,860,343	-		Rru_A3346	0.45	+0.9
3,860,343	-		Rru_A3346	0.45	-2.6
3,860,343	-		Rru_A3346	0.45	-0.0