Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3322
Experiment: acetate; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | acetate; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
3,831,904 | + | +1.1 | |||
3,831,904 | + | +2.0 | |||
3,832,357 | + | Rru_A3322 | 0.52 | -0.0 | |
3,832,358 | - | Rru_A3322 | 0.52 | -0.0 | |
3,832,359 | + | Rru_A3322 | 0.52 | -0.0 | |
3,832,365 | + | Rru_A3322 | 0.53 | -1.0 | |
3,832,450 | - | Rru_A3322 | 0.64 | -0.0 | |
3,832,485 | + | Rru_A3322 | 0.68 | -0.0 | |
3,832,485 | + | Rru_A3322 | 0.68 | -0.0 | |
3,832,485 | + | Rru_A3322 | 0.68 | -0.0 | |
3,832,485 | + | Rru_A3322 | 0.68 | -0.0 | |
3,832,485 | + | Rru_A3322 | 0.68 | -0.0 | |
3,832,485 | + | Rru_A3322 | 0.68 | -0.0 | |
3,832,486 | - | Rru_A3322 | 0.68 | -0.0 | |
3,832,783 | - | -0.0 | |||
3,832,882 | + | -0.0 | |||
3,832,891 | + | -0.0 | |||
3,833,136 | + | -0.3 |
Or see this region's nucleotide sequence