Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3302

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,799,846	-		Rru_A3301	0.33	+0.9
3,799,902	+		Rru_A3301	0.37	+0.4
3,799,902	+		Rru_A3301	0.37	-0.0
3,799,903	-		Rru_A3301	0.37	-0.7
3,799,903	-		Rru_A3301	0.37	-0.0
3,799,903	-		Rru_A3301	0.37	-0.0
3,799,926	+		Rru_A3301	0.39	-0.0
3,799,927	-		Rru_A3301	0.39	-0.0
3,799,927	-		Rru_A3301	0.39	+0.4
3,799,927	-		Rru_A3301	0.39	-0.0
3,799,927	-		Rru_A3301	0.39	-0.0
3,799,927	-		Rru_A3301	0.39	+1.3
3,799,950	+		Rru_A3301	0.41	+0.5
3,799,950	+		Rru_A3301	0.41	+0.3
3,799,951	-		Rru_A3301	0.41	-0.0
3,799,951	-		Rru_A3301	0.41	-1.0
3,799,951	-		Rru_A3301	0.41	-0.8
3,799,951	-		Rru_A3301	0.41	-0.0
3,800,025	+		Rru_A3301	0.47	-0.0
3,800,025	+		Rru_A3301	0.47	+0.2
3,800,025	+		Rru_A3301	0.47	-0.0
3,800,026	-		Rru_A3301	0.47	+0.6
3,800,026	-		Rru_A3301	0.47	+0.8
3,800,073	+		Rru_A3301	0.51	-0.0
3,800,073	+		Rru_A3301	0.51	-0.6
3,800,073	+		Rru_A3301	0.51	-0.3
3,800,074	-		Rru_A3301	0.51	+1.1
3,800,181	+		Rru_A3301	0.59	-0.0
3,800,182	-		Rru_A3301	0.59	-0.0
3,800,182	-		Rru_A3301	0.59	+0.3
3,800,224	-		Rru_A3301	0.63	+0.7
3,800,232	+		Rru_A3301	0.63	+0.5
3,800,255	+		Rru_A3301	0.65	-0.0
3,800,256	-		Rru_A3301	0.65	+0.8
3,800,256	-		Rru_A3301	0.65	-0.0
3,800,268	+		Rru_A3301	0.66	+0.6
3,800,268	+		Rru_A3301	0.66	-0.0
3,800,308	-		Rru_A3301	0.69	+0.4
3,800,355	+		Rru_A3301	0.73	-0.0
3,800,425	-		Rru_A3301	0.78	-1.0
3,800,425	-		Rru_A3301	0.78	-0.0
3,800,425	-		Rru_A3301	0.78	+0.4
3,800,901	+		Rru_A3302	0.14	+0.7
3,800,901	+		Rru_A3302	0.14	+0.5
3,801,103	-		Rru_A3302	0.29	+0.5
3,801,103	-		Rru_A3302	0.29	-0.0
3,801,188	+		Rru_A3302	0.35	-0.0
3,801,387	+		Rru_A3302	0.50	-0.0
3,801,387	+		Rru_A3302	0.50	-0.0
3,801,388	-		Rru_A3302	0.50	-0.0
3,801,388	-		Rru_A3302	0.50	-1.0
3,801,388	-		Rru_A3302	0.50	-0.0
3,801,391	-		Rru_A3302	0.50	+0.6
3,801,392	+		Rru_A3302	0.50	+0.8
3,801,393	-		Rru_A3302	0.50	-0.0
3,801,789	+		Rru_A3302	0.79	+1.0
3,801,790	-		Rru_A3302	0.79	-0.0
3,801,790	-		Rru_A3302	0.79	+0.8
3,801,790	-		Rru_A3302	0.79	-1.0
3,801,810	+		Rru_A3302	0.81	+1.0
3,801,810	+		Rru_A3302	0.81	+1.7
3,801,811	-		Rru_A3302	0.81	+0.5
3,801,811	-		Rru_A3302	0.81	+0.8
3,801,811	-		Rru_A3302	0.81	+0.6
3,801,811	-		Rru_A3302	0.81	-1.0
3,801,837	+		Rru_A3302	0.83	+0.7
3,801,837	+		Rru_A3302	0.83	+0.6
3,801,838	-		Rru_A3302	0.83	-0.0
3,801,843	+		Rru_A3302	0.83	+0.2
3,801,844	-		Rru_A3302	0.83	-0.3
3,801,919	-		Rru_A3302	0.89	+0.5
3,802,142	+				-0.0
3,802,142	+				-0.0
3,802,143	-				-0.1
3,802,143	-				-0.0
3,802,213	+				+0.8
3,802,213	+				+0.4
3,802,214	-				+0.1
3,802,214	-				-0.0
3,802,214	-				+0.8
3,802,214	-				+0.4
3,802,275	+				+0.3
3,802,344	+		Rru_A3303	0.10	-0.0
3,802,344	+		Rru_A3303	0.10	-0.0
3,802,344	+		Rru_A3303	0.10	+0.2
3,802,345	-		Rru_A3303	0.10	+0.2
3,802,345	-		Rru_A3303	0.10	-0.0
3,802,659	+		Rru_A3303	0.36	+0.3
3,802,659	+		Rru_A3303	0.36	+1.0
3,802,659	+		Rru_A3303	0.36	-0.0
3,802,659	+		Rru_A3303	0.36	+0.7
3,802,660	-		Rru_A3303	0.36	-0.0
3,802,660	-		Rru_A3303	0.36	+1.3
3,802,660	-		Rru_A3303	0.36	+0.4
3,802,660	-		Rru_A3303	0.36	-0.0
3,802,660	-		Rru_A3303	0.36	+1.3
3,802,660	-		Rru_A3303	0.36	-1.0
3,802,660	-		Rru_A3303	0.36	-0.0
3,802,660	-		Rru_A3303	0.36	+0.8
3,802,668	+		Rru_A3303	0.37	-0.0
3,802,668	+		Rru_A3303	0.37	-0.0
3,802,669	-		Rru_A3303	0.37	+0.4
3,802,725	+		Rru_A3303	0.42	-0.4
3,802,726	-		Rru_A3303	0.42	-0.0
3,802,726	-		Rru_A3303	0.42	+0.6
3,802,726	-		Rru_A3303	0.42	-0.0
3,802,726	-		Rru_A3303	0.42	+0.1
3,802,726	-		Rru_A3303	0.42	+0.4
3,802,726	-		Rru_A3303	0.42	+0.6
3,802,744	-		Rru_A3303	0.43	+0.5
3,802,773	-		Rru_A3303	0.46	-0.0
3,802,854	+		Rru_A3303	0.52	+1.6
3,802,854	+		Rru_A3303	0.52	-0.5
3,802,854	+		Rru_A3303	0.52	+1.2
3,802,854	+		Rru_A3303	0.52	+0.7
3,802,855	-		Rru_A3303	0.52	+0.5
3,803,058	+		Rru_A3303	0.69	+0.8
3,803,058	+		Rru_A3303	0.69	+0.4
3,803,059	-		Rru_A3303	0.69	+0.8
3,803,059	-		Rru_A3303	0.69	+0.4
3,803,059	-		Rru_A3303	0.69	+0.4