Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3290

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,786,667	+		Rru_A3289	0.71	+0.2
3,786,668	-		Rru_A3289	0.71	+1.5
3,786,786	+		Rru_A3289	0.82	+0.3
3,786,786	+		Rru_A3289	0.82	-0.0
3,786,970	+				+0.6
3,786,970	+				+0.6
3,786,970	+				-0.0
3,786,970	+				+0.5
3,786,971	-				-1.6
3,787,567	+		Rru_A3290	0.68	+1.6
3,787,567	+		Rru_A3290	0.68	+0.6
3,787,567	+		Rru_A3290	0.68	-0.0
3,787,567	+		Rru_A3290	0.68	-1.0
3,787,567	+		Rru_A3290	0.68	-0.0
3,787,567	+		Rru_A3290	0.68	-0.0
3,787,568	-		Rru_A3290	0.68	+0.7
3,787,568	-		Rru_A3290	0.68	-0.0
3,787,568	-		Rru_A3290	0.68	-0.0
3,787,694	+		Rru_A3290	0.82	-0.0
3,787,694	+		Rru_A3290	0.82	+3.2
3,787,694	+		Rru_A3290	0.82	+1.1
3,787,694	+		Rru_A3290	0.82	-0.0
3,787,695	-		Rru_A3290	0.83	-0.0
3,787,695	-		Rru_A3290	0.83	+0.6
3,787,695	-		Rru_A3290	0.83	+0.3
3,787,696	+		Rru_A3290	0.83	-0.0
3,787,696	+		Rru_A3290	0.83	-1.0
3,787,696	+		Rru_A3290	0.83	+1.9
3,787,696	+		Rru_A3290	0.83	+1.3
3,787,696	+		Rru_A3290	0.83	-0.0
3,787,696	+		Rru_A3290	0.83	-1.0
3,787,697	-		Rru_A3290	0.83	-0.0
3,787,697	-		Rru_A3290	0.83	-0.0
3,787,697	-		Rru_A3290	0.83	-0.1
3,787,697	-		Rru_A3290	0.83	-0.1
3,787,697	-		Rru_A3290	0.83	-1.0
3,787,697	-		Rru_A3290	0.83	+0.9
3,787,697	-		Rru_A3290	0.83	+0.6
3,787,699	+		Rru_A3290	0.83	-0.0
3,787,699	+		Rru_A3290	0.83	-0.0
3,787,699	+		Rru_A3290	0.83	+0.8
3,787,699	+		Rru_A3290	0.83	+0.8
3,787,699	+		Rru_A3290	0.83	-0.0
3,787,699	+		Rru_A3290	0.83	-0.0
3,787,700	-		Rru_A3290	0.83	-0.0
3,787,700	-		Rru_A3290	0.83	-0.0
3,787,700	-		Rru_A3290	0.83	-0.4
3,787,700	-		Rru_A3290	0.83	-0.0
3,787,700	-		Rru_A3290	0.83	-0.0
3,787,844	+				+1.2
3,787,844	+				+0.6
3,787,844	+				-1.0
3,787,929	-				-0.0
3,787,929	-				+0.6
3,787,930	+				-0.0
3,787,930	+				-0.0
3,787,930	+				+0.6
3,787,931	-				-0.0
3,787,931	-				+0.8
3,787,931	-				-0.4
3,787,931	-				-0.0
3,788,032	-		Rru_A3291	0.27	-0.0
3,788,168	-				-0.0
3,788,207	+				-0.0
3,788,207	+				+0.9
3,788,208	-				+0.8
3,788,208	-				-0.0
3,788,271	-				+1.3
3,788,391	+				+0.5
3,788,485	-		Rru_A3292	0.21	+0.7
3,788,654	+		Rru_A3292	0.43	+1.3
3,788,813	+		Rru_A3292	0.63	-0.0
3,788,814	-		Rru_A3292	0.63	-0.0
3,788,814	-		Rru_A3292	0.63	-0.0
3,788,814	-		Rru_A3292	0.63	-0.0