Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3271

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,768,371	+				-0.0
3,768,395	-				+1.5
3,768,404	+				-0.0
3,768,440	+				-0.0
3,768,440	+				-0.0
3,768,440	+				+1.0
3,768,440	+				-0.0
3,768,441	-				+0.3
3,768,441	-				-0.2
3,768,441	-				-1.0
3,768,441	-				-1.0
3,768,441	-				-0.0
3,768,441	-				+0.4
3,768,633	+				-0.0
3,768,633	+				+0.1
3,768,633	+				-0.0
3,768,633	+				-1.0
3,768,633	+				-0.0
3,768,633	+				-0.0
3,768,633	+				-1.6
3,768,633	+				-0.0
3,768,633	+				-1.0
3,768,634	-				-1.0
3,768,634	-				-0.0
3,768,634	-				+1.4
3,768,634	-				-1.0
3,768,634	-				-0.0
3,768,634	-				+0.3
3,768,634	-				-0.0
3,768,634	-				-0.0
3,768,634	-				+0.9
3,768,634	-				-1.0
3,768,634	-				-0.0
3,768,634	-				-0.0
3,768,634	-				-0.0
3,768,634	-				-0.0
3,768,634	-				-1.0
3,768,634	-				-0.0
3,768,639	+				-0.0
3,768,639	+				-1.0
3,768,639	+				-0.0
3,768,639	+				-0.0
3,768,640	-				-1.0
3,768,640	-				-0.0
3,768,743	+		Rru_A3270	0.20	-0.0
3,768,744	-		Rru_A3270	0.20	+0.2
3,768,765	+		Rru_A3270	0.23	-0.0
3,768,766	-		Rru_A3270	0.23	-0.0
3,768,766	-		Rru_A3270	0.23	-0.0
3,769,107	+		Rru_A3270	0.67	+0.1
3,769,107	+		Rru_A3270	0.67	-0.3
3,769,107	+		Rru_A3270	0.67	-0.0
3,769,107	+		Rru_A3270	0.67	+0.5
3,769,108	-		Rru_A3270	0.67	-1.2
3,769,108	-		Rru_A3270	0.67	-0.0
3,769,109	+		Rru_A3270	0.68	-0.4
3,769,110	-		Rru_A3270	0.68	-0.0
3,769,110	-		Rru_A3270	0.68	+0.1
3,769,110	-		Rru_A3270	0.68	-1.6
3,769,704	+		Rru_A3271	0.54	-0.0
3,769,705	-		Rru_A3271	0.54	-0.2
3,769,705	-		Rru_A3271	0.54	+0.3
3,769,744	+		Rru_A3271	0.60	-0.0
3,769,745	-		Rru_A3271	0.60	+0.3
3,769,745	-		Rru_A3271	0.60	-0.6
3,769,869	-		Rru_A3271	0.79	-0.0
3,769,869	-		Rru_A3271	0.79	+0.2
3,770,073	+				-0.0
3,770,073	+				+0.8
3,770,073	+				+0.1
3,770,073	+				-0.4
3,770,074	-				+1.1
3,770,074	-				-2.0
3,770,074	-				-0.3
3,770,074	-				+0.3
3,770,075	+				-0.0
3,770,076	-				-0.6
3,770,076	-				-2.0
3,770,238	+		Rru_A3272	0.18	-0.3
3,770,238	+		Rru_A3272	0.18	+0.2
3,770,238	+		Rru_A3272	0.18	+0.8
3,770,238	+		Rru_A3272	0.18	+0.3
3,770,238	+		Rru_A3272	0.18	-0.0
3,770,239	-		Rru_A3272	0.18	-0.0
3,770,239	-		Rru_A3272	0.18	-0.0
3,770,367	+		Rru_A3272	0.31	-0.0
3,770,367	+		Rru_A3272	0.31	-0.1
3,770,368	-		Rru_A3272	0.31	+0.5
3,770,368	-		Rru_A3272	0.31	+0.2
3,770,368	-		Rru_A3272	0.31	-0.0
3,770,368	-		Rru_A3272	0.31	-0.0
3,770,368	-		Rru_A3272	0.31	-0.0
3,770,602	+		Rru_A3272	0.56	-0.0
3,770,602	+		Rru_A3272	0.56	-0.0
3,770,603	-		Rru_A3272	0.56	+0.2
3,770,603	-		Rru_A3272	0.56	-0.0
3,770,603	-		Rru_A3272	0.56	-0.5
3,770,886	+		Rru_A3272	0.86	-0.1
3,770,887	-		Rru_A3272	0.86	-0.3
3,770,919	+		Rru_A3272	0.90	-0.0
3,770,919	+		Rru_A3272	0.90	-0.0
3,770,919	+		Rru_A3272	0.90	-1.0
3,770,920	-		Rru_A3272	0.90	+1.5