Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3260

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,755,975	+				-0.0
3,755,975	+				+1.4
3,755,976	-				+0.4
3,755,976	-				-0.0
3,756,032	+				+1.4
3,756,032	+				-0.0
3,756,032	+				+1.2
3,756,032	+				+1.5
3,756,032	+				-0.0
3,756,032	+				-0.0
3,756,033	-				+0.9
3,756,033	-				+0.9
3,756,078	+				+1.6
3,756,079	-				+1.0
3,756,197	-		Rru_A3259	0.19	-0.0
3,756,307	+		Rru_A3259	0.39	-0.0
3,756,307	+		Rru_A3259	0.39	-0.0
3,756,307	+		Rru_A3259	0.39	-0.0
3,756,307	+		Rru_A3259	0.39	-0.0
3,756,307	+		Rru_A3259	0.39	-0.0
3,756,308	-		Rru_A3259	0.39	-0.0
3,756,361	+		Rru_A3259	0.49	+0.7
3,756,361	+		Rru_A3259	0.49	-0.0
3,756,362	-		Rru_A3259	0.49	-0.0
3,756,394	+		Rru_A3259	0.55	-0.0
3,756,395	-		Rru_A3259	0.55	-0.0
3,756,538	+		Rru_A3259	0.81	-0.0
3,756,539	-		Rru_A3259	0.82	+1.6
3,756,653	-				-0.0
3,756,653	-				-0.0
3,756,653	-				+1.5
3,756,875	+		Rru_A3260	0.12	-1.0
3,756,875	+		Rru_A3260	0.12	-0.6
3,756,875	+		Rru_A3260	0.12	+0.4
3,756,876	-		Rru_A3260	0.12	-0.0
3,756,876	-		Rru_A3260	0.12	-2.0
3,756,876	-		Rru_A3260	0.12	-0.0
3,756,876	-		Rru_A3260	0.12	+0.9
3,756,876	-		Rru_A3260	0.12	-0.0
3,756,876	-		Rru_A3260	0.12	+1.2
3,756,917	+		Rru_A3260	0.15	-0.0
3,756,917	+		Rru_A3260	0.15	+0.4
3,756,935	+		Rru_A3260	0.17	-1.0
3,756,936	-		Rru_A3260	0.17	+0.5
3,756,936	-		Rru_A3260	0.17	+1.3
3,757,314	+		Rru_A3260	0.46	+1.1
3,757,314	+		Rru_A3260	0.46	-0.0
3,757,315	-		Rru_A3260	0.46	+0.6
3,757,315	-		Rru_A3260	0.46	+0.5
3,757,315	-		Rru_A3260	0.46	+1.3
3,757,315	-		Rru_A3260	0.46	+0.9
3,757,838	+		Rru_A3260	0.87	-0.0
3,757,838	+		Rru_A3260	0.87	+0.8
3,757,839	-		Rru_A3260	0.87	+0.8
3,758,001	-				-1.6
3,758,256	+				+0.5
3,758,256	+				+0.3
3,758,257	-				+0.6
3,758,428	+				+1.6
3,758,428	+				-0.6
3,758,429	-				+1.9
3,758,544	+		Rru_A3261	0.29	-0.0
3,758,544	+		Rru_A3261	0.29	+1.0
3,758,698	+		Rru_A3261	0.68	-0.6
3,758,863	+				+0.1
3,758,870	+				-1.6
3,758,939	+				+1.2
3,758,939	+				+0.1
3,758,940	-				+0.6
3,758,940	-				-0.0
3,758,940	-				-0.1
3,758,993	-				-0.0
3,758,993	-				+0.7
3,758,995	-				-0.0
3,758,995	-				-0.0