Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3254

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,749,461	+		Rru_A3253	0.29	-0.0
3,749,463	+		Rru_A3253	0.29	+0.2
3,749,463	+		Rru_A3253	0.29	-0.5
3,749,464	-		Rru_A3253	0.29	-0.0
3,749,464	-		Rru_A3253	0.29	-0.1
3,749,809	+		Rru_A3253	0.61	-0.0
3,749,809	+		Rru_A3253	0.61	-1.0
3,749,809	+		Rru_A3253	0.61	-0.0
3,749,810	-		Rru_A3253	0.61	-0.0
3,749,810	-		Rru_A3253	0.61	-1.0
3,749,810	-		Rru_A3253	0.61	-1.0
3,749,810	-		Rru_A3253	0.61	-0.0
3,750,076	-		Rru_A3253	0.86	-1.6
3,750,237	-				+0.4
3,750,237	-				+0.2
3,750,256	-				+1.3
3,750,256	-				+1.9
3,750,256	-				-0.0
3,750,256	-				+1.5
3,750,266	-				+1.6
3,750,266	-				+1.1
3,750,267	+				-0.0
3,750,268	-				+1.1
3,750,268	-				+1.6
3,750,300	+				-1.0
3,750,301	-				+1.4
3,750,301	-				+1.9
3,750,301	-				+2.0
3,750,301	-				+1.5
3,750,301	-				-0.0
3,750,592	+		Rru_A3254	0.25	-0.0
3,750,592	+		Rru_A3254	0.25	-0.0
3,750,593	-		Rru_A3254	0.25	-0.0
3,750,742	-		Rru_A3254	0.44	-1.2
3,750,742	-		Rru_A3254	0.44	-0.0
3,750,999	+		Rru_A3254	0.77	-0.0
3,751,000	-		Rru_A3254	0.77	-0.0
3,751,000	-		Rru_A3254	0.77	-0.0
3,751,793	+		Rru_A3255	0.69	-0.0
3,751,794	-		Rru_A3255	0.69	+0.5
3,751,794	-		Rru_A3255	0.69	-0.6
3,751,815	+		Rru_A3255	0.72	-0.0
3,751,815	+		Rru_A3255	0.72	-0.0
3,751,816	-		Rru_A3255	0.72	-0.0
3,751,816	-		Rru_A3255	0.72	+0.7
3,751,818	-		Rru_A3255	0.72	-0.8
3,751,881	-		Rru_A3255	0.79	-0.2
3,752,024	+				-0.0
3,752,025	-				-0.2
3,752,025	-				+0.5
3,752,025	-				+0.4
3,752,025	-				-0.2
3,752,025	-				+0.4
3,752,025	-				-0.0
3,752,025	-				-0.0
3,752,094	+				-0.0
3,752,094	+				-0.0