Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3229

Experiment: acetate; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate; Light intensity 9 uM
3,721,895	+				-0.0
3,721,896	-				-1.6
3,721,896	-				-3.1
3,721,896	-				-0.0
3,721,961	+				-1.4
3,721,961	+				-0.0
3,721,962	-				-0.0
3,721,962	-				-0.0
3,721,982	+				-1.6
3,721,983	-				+0.6
3,721,983	-				-0.0
3,722,040	+				-0.8
3,722,071	+				-1.0
3,722,134	-				-1.3
3,722,181	+				+0.4
3,722,181	+				+0.5
3,722,182	-				-0.8
3,722,185	+				+1.0
3,722,261	-				-1.0
3,722,545	+		Rru_A3228	0.64	-1.0
3,722,546	-		Rru_A3228	0.64	-0.0
3,722,792	+				-0.0
3,722,792	+				+0.9
3,722,792	+				+1.2
3,722,792	+				+1.2
3,722,792	+				+1.6
3,722,793	-				-1.5
3,722,838	+				-0.0
3,722,838	+				+0.8
3,722,838	+				+0.7
3,722,838	+				+1.2
3,722,838	+				-0.0
3,722,838	+				+2.0
3,722,838	+				-0.0
3,722,838	+				-0.0
3,722,838	+				+1.2
3,722,838	+				+1.3
3,722,838	+				-0.0
3,722,838	+				+0.3
3,722,838	+				-0.0
3,722,838	+				+1.2
3,722,839	-				-0.9
3,722,839	-				-0.0
3,722,839	-				-0.0
3,722,839	-				-1.3
3,722,839	-				-0.3
3,722,839	-				-0.2
3,722,839	-				-0.0
3,722,843	+				+1.1
3,722,844	-				-0.0
3,723,134	+		Rru_A3229	0.43	-0.2
3,723,134	+		Rru_A3229	0.43	-0.0
3,723,134	+		Rru_A3229	0.43	-0.0
3,723,134	+		Rru_A3229	0.43	+0.1
3,723,134	+		Rru_A3229	0.43	-0.0
3,723,134	+		Rru_A3229	0.43	+0.2
3,723,134	+		Rru_A3229	0.43	-1.6
3,723,134	+		Rru_A3229	0.43	-0.6
3,723,134	+		Rru_A3229	0.43	+1.0
3,723,135	-		Rru_A3229	0.43	-0.0
3,723,135	-		Rru_A3229	0.43	-0.0
3,723,135	-		Rru_A3229	0.43	-0.0
3,723,135	-		Rru_A3229	0.43	-0.2
3,723,135	-		Rru_A3229	0.43	-0.3
3,723,135	-		Rru_A3229	0.43	-0.0
3,723,413	+		Rru_A3229	0.85	-0.0
3,723,413	+		Rru_A3229	0.85	+0.4
3,723,413	+		Rru_A3229	0.85	+0.3
3,723,413	+		Rru_A3229	0.85	-0.0
3,723,413	+		Rru_A3229	0.85	-1.6
3,723,413	+		Rru_A3229	0.85	-0.0
3,723,414	-		Rru_A3229	0.85	-0.5
3,723,414	-		Rru_A3229	0.85	-0.0
3,723,417	+		Rru_A3229	0.85	-0.0
3,723,417	+		Rru_A3229	0.85	-0.0
3,723,417	+		Rru_A3229	0.85	+0.9
3,723,418	-		Rru_A3229	0.85	+1.3
3,723,610	+				-0.7
3,723,610	+				+0.1
3,723,611	-				+0.5
3,723,891	+		Rru_A3230	0.13	-0.5
3,724,089	+		Rru_A3230	0.24	-0.2
3,724,089	+		Rru_A3230	0.24	-0.0
3,724,089	+		Rru_A3230	0.24	+0.5
3,724,090	-		Rru_A3230	0.24	+0.2
3,724,090	-		Rru_A3230	0.24	-0.0
3,724,129	-		Rru_A3230	0.27	-0.3
3,724,129	-		Rru_A3230	0.27	-0.0
3,724,464	+		Rru_A3230	0.45	+0.5
3,724,470	+		Rru_A3230	0.46	+0.3
3,724,470	+		Rru_A3230	0.46	+0.9
3,724,470	+		Rru_A3230	0.46	-0.0
3,724,471	-		Rru_A3230	0.46	+0.1
3,724,471	-		Rru_A3230	0.46	-1.0
3,724,471	-		Rru_A3230	0.46	-0.0